Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col4a6B1AVK5 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col4a6B1AVK5 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col4a6B1AVK5 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col4a6B1AVK5 Gm23912-201ENSMUST00000104687 87 ntBASIC12.66□□□□□ -0.38
Col4a6B1AVK5 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col4a6B1AVK5 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Col4a6B1AVK5 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col4a6B1AVK5 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Col4a6B1AVK5 Gm23218-201ENSMUST00000158124 276 ntBASIC12.66□□□□□ -0.38
Col4a6B1AVK5 Gm27910-201ENSMUST00000185004 107 ntBASIC12.66□□□□□ -0.38
Col4a6B1AVK5 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC12.66□□□□□ -0.38
Col4a6B1AVK5 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC12.66□□□□□ -0.38
Col4a6B1AVK5 Gm3793-201ENSMUST00000204973 672 ntBASIC12.66□□□□□ -0.38
Col4a6B1AVK5 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC12.66□□□□□ -0.38
Col4a6B1AVK5 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col4a6B1AVK5 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col4a6B1AVK5 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC12.66□□□□□ -0.38
Col4a6B1AVK5 Gm18198-201ENSMUST00000204986 1551 ntBASIC12.66□□□□□ -0.38
Col4a6B1AVK5 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.66□□□□□ -0.38
Col4a6B1AVK5 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col4a6B1AVK5 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.66□□□□□ -0.38
Col4a6B1AVK5 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.65□□□□□ -0.38
Col4a6B1AVK5 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col4a6B1AVK5 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col4a6B1AVK5 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col4a6B1AVK5 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col4a6B1AVK5 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.65□□□□□ -0.38
Col4a6B1AVK5 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col4a6B1AVK5 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col4a6B1AVK5 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col4a6B1AVK5 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC12.65□□□□□ -0.38
Col4a6B1AVK5 Gm13668-201ENSMUST00000119237 1001 ntBASIC12.65□□□□□ -0.38
Col4a6B1AVK5 Gm1848-201ENSMUST00000120711 789 ntBASIC12.65□□□□□ -0.38
Col4a6B1AVK5 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC12.65□□□□□ -0.38
Col4a6B1AVK5 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Col4a6B1AVK5 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC12.65□□□□□ -0.38
Col4a6B1AVK5 Gm4034-201ENSMUST00000187674 480 ntBASIC12.65□□□□□ -0.38
Col4a6B1AVK5 Gm28324-201ENSMUST00000187913 264 ntBASIC12.65□□□□□ -0.38
Col4a6B1AVK5 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.65□□□□□ -0.38
Col4a6B1AVK5 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC12.65□□□□□ -0.38
Col4a6B1AVK5 Gm44421-201ENSMUST00000205064 1221 ntBASIC12.65□□□□□ -0.38
Col4a6B1AVK5 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Col4a6B1AVK5 Gm3619-201ENSMUST00000219947 775 ntBASIC12.65□□□□□ -0.38
Col4a6B1AVK5 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.65□□□□□ -0.38
Col4a6B1AVK5 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col4a6B1AVK5 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Col4a6B1AVK5 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col4a6B1AVK5 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col4a6B1AVK5 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col4a6B1AVK5 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col4a6B1AVK5 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col4a6B1AVK5 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col4a6B1AVK5 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.65□□□□□ -0.38
Col4a6B1AVK5 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col4a6B1AVK5 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col4a6B1AVK5 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col4a6B1AVK5 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Col4a6B1AVK5 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Col4a6B1AVK5 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
Col4a6B1AVK5 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Col4a6B1AVK5 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col4a6B1AVK5 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col4a6B1AVK5 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col4a6B1AVK5 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col4a6B1AVK5 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col4a6B1AVK5 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col4a6B1AVK5 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC12.64□□□□□ -0.39
Col4a6B1AVK5 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.64□□□□□ -0.39
Col4a6B1AVK5 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col4a6B1AVK5 Gm42657-201ENSMUST00000201746 211 ntBASIC12.64□□□□□ -0.39
Col4a6B1AVK5 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Col4a6B1AVK5 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col4a6B1AVK5 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col4a6B1AVK5 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col4a6B1AVK5 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col4a6B1AVK5 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Col4a6B1AVK5 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col4a6B1AVK5 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Col4a6B1AVK5 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col4a6B1AVK5 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col4a6B1AVK5 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Col4a6B1AVK5 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col4a6B1AVK5 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col4a6B1AVK5 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col4a6B1AVK5 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Col4a6B1AVK5 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col4a6B1AVK5 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col4a6B1AVK5 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col4a6B1AVK5 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Col4a6B1AVK5 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Col4a6B1AVK5 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col4a6B1AVK5 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col4a6B1AVK5 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col4a6B1AVK5 Grk6-205ENSMUST00000224653 2976 ntBASIC12.64□□□□□ -0.39
Col4a6B1AVK5 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Col4a6B1AVK5 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Col4a6B1AVK5 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.64□□□□□ -0.39
Col4a6B1AVK5 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.64□□□□□ -0.39
Col4a6B1AVK5 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms