Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cfap99A0A140LIX9 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cfap99A0A140LIX9 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cfap99A0A140LIX9 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cfap99A0A140LIX9 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cfap99A0A140LIX9 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cfap99A0A140LIX9 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cfap99A0A140LIX9 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cfap99A0A140LIX9 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC15.04■□□□□ -0
Cfap99A0A140LIX9 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC15.04■□□□□ -0
Cfap99A0A140LIX9 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cfap99A0A140LIX9 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cfap99A0A140LIX9 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
Cfap99A0A140LIX9 Gm38317-201ENSMUST00000195564 343 ntBASIC15.04■□□□□ -0
Cfap99A0A140LIX9 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC15.04■□□□□ -0
Cfap99A0A140LIX9 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cfap99A0A140LIX9 Gm44967-201ENSMUST00000207047 631 ntBASIC15.04■□□□□ -0
Cfap99A0A140LIX9 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC15.04■□□□□ -0
Cfap99A0A140LIX9 Gm19208-201ENSMUST00000213861 912 ntBASIC15.04■□□□□ -0
Cfap99A0A140LIX9 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cfap99A0A140LIX9 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cfap99A0A140LIX9 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cfap99A0A140LIX9 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cfap99A0A140LIX9 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cfap99A0A140LIX9 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cfap99A0A140LIX9 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cfap99A0A140LIX9 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cfap99A0A140LIX9 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cfap99A0A140LIX9 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cfap99A0A140LIX9 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cfap99A0A140LIX9 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cfap99A0A140LIX9 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cfap99A0A140LIX9 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Cfap99A0A140LIX9 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cfap99A0A140LIX9 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cfap99A0A140LIX9 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cfap99A0A140LIX9 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cfap99A0A140LIX9 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
Cfap99A0A140LIX9 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cfap99A0A140LIX9 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cfap99A0A140LIX9 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cfap99A0A140LIX9 Gm19221-201ENSMUST00000221827 1477 ntBASIC15.03■□□□□ -0
Cfap99A0A140LIX9 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cfap99A0A140LIX9 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cfap99A0A140LIX9 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
Cfap99A0A140LIX9 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Cfap99A0A140LIX9 Gm23270-201ENSMUST00000104055 131 ntBASIC15.03■□□□□ -0
Cfap99A0A140LIX9 Gm14130-201ENSMUST00000118417 987 ntBASIC15.03■□□□□ -0
Cfap99A0A140LIX9 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC15.03■□□□□ -0
Cfap99A0A140LIX9 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cfap99A0A140LIX9 Gm9678-201ENSMUST00000198979 1149 ntBASIC15.03■□□□□ -0
Cfap99A0A140LIX9 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cfap99A0A140LIX9 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cfap99A0A140LIX9 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cfap99A0A140LIX9 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Cfap99A0A140LIX9 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cfap99A0A140LIX9 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cfap99A0A140LIX9 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Cfap99A0A140LIX9 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cfap99A0A140LIX9 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cfap99A0A140LIX9 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cfap99A0A140LIX9 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cfap99A0A140LIX9 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC15.03■□□□□ -0
Cfap99A0A140LIX9 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cfap99A0A140LIX9 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cfap99A0A140LIX9 Gm38157-201ENSMUST00000194178 1698 ntBASIC15.03■□□□□ -0
Cfap99A0A140LIX9 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Cfap99A0A140LIX9 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cfap99A0A140LIX9 AC123857.2-201ENSMUST00000225756 1582 ntBASIC15.02■□□□□ -0
Cfap99A0A140LIX9 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cfap99A0A140LIX9 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
Cfap99A0A140LIX9 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC15.02■□□□□ -0
Cfap99A0A140LIX9 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Cfap99A0A140LIX9 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cfap99A0A140LIX9 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cfap99A0A140LIX9 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cfap99A0A140LIX9 Gm28323-201ENSMUST00000186817 2499 ntBASIC15.02■□□□□ -0
Cfap99A0A140LIX9 Ntrk2-204ENSMUST00000224259 3049 ntBASIC15.02■□□□□ -0
Cfap99A0A140LIX9 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Cfap99A0A140LIX9 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC15.02■□□□□ -0
Cfap99A0A140LIX9 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cfap99A0A140LIX9 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cfap99A0A140LIX9 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Cfap99A0A140LIX9 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Cfap99A0A140LIX9 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC15.02■□□□□ -0
Cfap99A0A140LIX9 Gm4909-201ENSMUST00000118749 794 ntBASIC15.02■□□□□ -0
Cfap99A0A140LIX9 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC15.02■□□□□ -0
Cfap99A0A140LIX9 Gm22121-201ENSMUST00000175148 54 ntBASIC15.02■□□□□ -0
Cfap99A0A140LIX9 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cfap99A0A140LIX9 Gm2546-201ENSMUST00000182630 991 ntBASIC15.02■□□□□ -0
Cfap99A0A140LIX9 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC15.02■□□□□ -0
Cfap99A0A140LIX9 Gm38297-201ENSMUST00000195122 1057 ntBASIC15.02■□□□□ -0
Cfap99A0A140LIX9 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cfap99A0A140LIX9 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC15.02■□□□□ -0
Cfap99A0A140LIX9 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cfap99A0A140LIX9 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cfap99A0A140LIX9 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC15.02□□□□□ -0.01
Cfap99A0A140LIX9 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Cfap99A0A140LIX9 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC15.02□□□□□ -0.01
Cfap99A0A140LIX9 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms