Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AC005695.3-201ENST00000614522 232 ntBASIC14.76□□□□□ -0.05
CCDC187A0A096LP49 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.76□□□□□ -0.05
CCDC187A0A096LP49 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC187A0A096LP49 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC187A0A096LP49 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC187A0A096LP49 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC14.76□□□□□ -0.05
CCDC187A0A096LP49 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
CCDC187A0A096LP49 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
CCDC187A0A096LP49 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14.76□□□□□ -0.05
CCDC187A0A096LP49 PCDHA14-201ENST00000506751 2298 ntBASIC14.76□□□□□ -0.05
CCDC187A0A096LP49 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.76□□□□□ -0.05
CCDC187A0A096LP49 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC187A0A096LP49 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC187A0A096LP49 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
CCDC187A0A096LP49 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CCDC187A0A096LP49 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC187A0A096LP49 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC187A0A096LP49 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC187A0A096LP49 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.75□□□□□ -0.05
CCDC187A0A096LP49 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC187A0A096LP49 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC14.75□□□□□ -0.05
CCDC187A0A096LP49 AC079328.2-201ENST00000561241 3354 ntBASIC14.75□□□□□ -0.05
CCDC187A0A096LP49 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC187A0A096LP49 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.75□□□□□ -0.05
CCDC187A0A096LP49 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC187A0A096LP49 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC187A0A096LP49 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.75□□□□□ -0.05
CCDC187A0A096LP49 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
CCDC187A0A096LP49 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.75□□□□□ -0.05
CCDC187A0A096LP49 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.75□□□□□ -0.05
CCDC187A0A096LP49 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.75□□□□□ -0.05
CCDC187A0A096LP49 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.75□□□□□ -0.05
CCDC187A0A096LP49 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
CCDC187A0A096LP49 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CCDC187A0A096LP49 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CCDC187A0A096LP49 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.75□□□□□ -0.05
CCDC187A0A096LP49 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.75□□□□□ -0.05
CCDC187A0A096LP49 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CCDC187A0A096LP49 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC14.75□□□□□ -0.05
CCDC187A0A096LP49 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC14.75□□□□□ -0.05
CCDC187A0A096LP49 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC14.75□□□□□ -0.05
CCDC187A0A096LP49 AC004898.1-201ENST00000451057 766 ntBASIC14.75□□□□□ -0.05
CCDC187A0A096LP49 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.75□□□□□ -0.05
CCDC187A0A096LP49 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC14.75□□□□□ -0.05
CCDC187A0A096LP49 ACR-203ENST00000529621 708 ntTSL 5 BASIC14.75□□□□□ -0.05
CCDC187A0A096LP49 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC187A0A096LP49 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC14.75□□□□□ -0.05
CCDC187A0A096LP49 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.75□□□□□ -0.05
CCDC187A0A096LP49 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CCDC187A0A096LP49 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC187A0A096LP49 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC14.75□□□□□ -0.05
CCDC187A0A096LP49 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.75□□□□□ -0.05
CCDC187A0A096LP49 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.75□□□□□ -0.05
CCDC187A0A096LP49 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CCDC187A0A096LP49 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC187A0A096LP49 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC187A0A096LP49 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC187A0A096LP49 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC187A0A096LP49 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC187A0A096LP49 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CCDC187A0A096LP49 AC015818.8-201ENST00000587907 1519 ntBASIC14.75□□□□□ -0.05
CCDC187A0A096LP49 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.75□□□□□ -0.05
CCDC187A0A096LP49 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC187A0A096LP49 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.75□□□□□ -0.05
CCDC187A0A096LP49 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC187A0A096LP49 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.75□□□□□ -0.05
CCDC187A0A096LP49 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC187A0A096LP49 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CCDC187A0A096LP49 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.74□□□□□ -0.05
CCDC187A0A096LP49 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC187A0A096LP49 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CCDC187A0A096LP49 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC187A0A096LP49 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CCDC187A0A096LP49 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
CCDC187A0A096LP49 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC187A0A096LP49 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.74□□□□□ -0.05
CCDC187A0A096LP49 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC187A0A096LP49 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC187A0A096LP49 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC187A0A096LP49 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC187A0A096LP49 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC187A0A096LP49 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC187A0A096LP49 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
CCDC187A0A096LP49 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
CCDC187A0A096LP49 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC187A0A096LP49 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CCDC187A0A096LP49 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC187A0A096LP49 NUS1P3-201ENST00000423502 862 ntBASIC14.74□□□□□ -0.05
CCDC187A0A096LP49 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CCDC187A0A096LP49 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC14.74□□□□□ -0.05
CCDC187A0A096LP49 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.74□□□□□ -0.05
CCDC187A0A096LP49 AC114812.1-204ENST00000449669 728 ntBASIC14.74□□□□□ -0.05
CCDC187A0A096LP49 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC14.74□□□□□ -0.05
CCDC187A0A096LP49 IGHJ2P-201ENST00000454480 60 ntBASIC14.74□□□□□ -0.05
CCDC187A0A096LP49 AKR7A2P1-201ENST00000460134 915 ntBASIC14.74□□□□□ -0.05
CCDC187A0A096LP49 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
CCDC187A0A096LP49 AC091804.1-201ENST00000486888 567 ntBASIC14.74□□□□□ -0.05
CCDC187A0A096LP49 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CCDC187A0A096LP49 SCARNA20.5-201ENST00000516991 142 ntBASIC14.74□□□□□ -0.05
CCDC187A0A096LP49 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms