Protein–RNA interactions for Protein: Q9Z2L7

Crlf3, Cytokine receptor-like factor 3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf3Q9Z2L7 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Crlf3Q9Z2L7 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.73□□□□□ -0.37
Crlf3Q9Z2L7 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Crlf3Q9Z2L7 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Crlf3Q9Z2L7 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.73□□□□□ -0.37
Crlf3Q9Z2L7 Gm26035-201ENSMUST00000083065 308 ntBASIC12.73□□□□□ -0.37
Crlf3Q9Z2L7 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Crlf3Q9Z2L7 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Crlf3Q9Z2L7 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Crlf3Q9Z2L7 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Crlf3Q9Z2L7 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Crlf3Q9Z2L7 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Crlf3Q9Z2L7 Cog3-203ENSMUST00000227473 4197 ntBASIC12.73□□□□□ -0.37
Crlf3Q9Z2L7 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Crlf3Q9Z2L7 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
Crlf3Q9Z2L7 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Crlf3Q9Z2L7 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Crlf3Q9Z2L7 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Crlf3Q9Z2L7 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Crlf3Q9Z2L7 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.72□□□□□ -0.37
Crlf3Q9Z2L7 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Crlf3Q9Z2L7 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Crlf3Q9Z2L7 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Crlf3Q9Z2L7 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Crlf3Q9Z2L7 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Crlf3Q9Z2L7 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Crlf3Q9Z2L7 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Crlf3Q9Z2L7 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Crlf3Q9Z2L7 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
Crlf3Q9Z2L7 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Crlf3Q9Z2L7 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Crlf3Q9Z2L7 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Crlf3Q9Z2L7 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Crlf3Q9Z2L7 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Crlf3Q9Z2L7 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Crlf3Q9Z2L7 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Crlf3Q9Z2L7 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Crlf3Q9Z2L7 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Crlf3Q9Z2L7 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Crlf3Q9Z2L7 Gm5354-201ENSMUST00000182417 973 ntBASIC12.72□□□□□ -0.37
Crlf3Q9Z2L7 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.72□□□□□ -0.37
Crlf3Q9Z2L7 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Crlf3Q9Z2L7 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.72□□□□□ -0.37
Crlf3Q9Z2L7 Gm45384-201ENSMUST00000210451 277 ntBASIC12.72□□□□□ -0.37
Crlf3Q9Z2L7 Gm6458-201ENSMUST00000211573 635 ntBASIC12.72□□□□□ -0.37
Crlf3Q9Z2L7 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.72□□□□□ -0.37
Crlf3Q9Z2L7 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.72□□□□□ -0.37
Crlf3Q9Z2L7 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Crlf3Q9Z2L7 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Crlf3Q9Z2L7 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Crlf3Q9Z2L7 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Crlf3Q9Z2L7 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Crlf3Q9Z2L7 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.72□□□□□ -0.37
Crlf3Q9Z2L7 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Crlf3Q9Z2L7 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Crlf3Q9Z2L7 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Crlf3Q9Z2L7 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Crlf3Q9Z2L7 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Crlf3Q9Z2L7 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Crlf3Q9Z2L7 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Crlf3Q9Z2L7 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
Crlf3Q9Z2L7 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.71□□□□□ -0.37
Crlf3Q9Z2L7 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Crlf3Q9Z2L7 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Crlf3Q9Z2L7 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Crlf3Q9Z2L7 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Crlf3Q9Z2L7 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Crlf3Q9Z2L7 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Crlf3Q9Z2L7 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Crlf3Q9Z2L7 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Crlf3Q9Z2L7 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.71□□□□□ -0.37
Crlf3Q9Z2L7 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Crlf3Q9Z2L7 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.71□□□□□ -0.37
Crlf3Q9Z2L7 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Crlf3Q9Z2L7 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Crlf3Q9Z2L7 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Crlf3Q9Z2L7 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Crlf3Q9Z2L7 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Crlf3Q9Z2L7 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Crlf3Q9Z2L7 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Crlf3Q9Z2L7 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Crlf3Q9Z2L7 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.71□□□□□ -0.37
Crlf3Q9Z2L7 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.71□□□□□ -0.37
Crlf3Q9Z2L7 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Crlf3Q9Z2L7 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.71□□□□□ -0.37
Crlf3Q9Z2L7 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC12.71□□□□□ -0.37
Crlf3Q9Z2L7 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Crlf3Q9Z2L7 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.71□□□□□ -0.37
Crlf3Q9Z2L7 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Crlf3Q9Z2L7 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Crlf3Q9Z2L7 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Crlf3Q9Z2L7 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Crlf3Q9Z2L7 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Crlf3Q9Z2L7 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Crlf3Q9Z2L7 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Crlf3Q9Z2L7 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Crlf3Q9Z2L7 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Crlf3Q9Z2L7 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Crlf3Q9Z2L7 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.71□□□□□ -0.38
Crlf3Q9Z2L7 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms