Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nubp2Q9R061 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nubp2Q9R061 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nubp2Q9R061 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nubp2Q9R061 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nubp2Q9R061 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nubp2Q9R061 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC11.22□□□□□ -0.61
Nubp2Q9R061 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nubp2Q9R061 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nubp2Q9R061 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nubp2Q9R061 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nubp2Q9R061 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
Nubp2Q9R061 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nubp2Q9R061 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.22□□□□□ -0.61
Nubp2Q9R061 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nubp2Q9R061 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nubp2Q9R061 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Nubp2Q9R061 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nubp2Q9R061 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nubp2Q9R061 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.21□□□□□ -0.61
Nubp2Q9R061 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nubp2Q9R061 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nubp2Q9R061 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nubp2Q9R061 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.61
Nubp2Q9R061 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nubp2Q9R061 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Nubp2Q9R061 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nubp2Q9R061 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Nubp2Q9R061 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC11.21□□□□□ -0.61
Nubp2Q9R061 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nubp2Q9R061 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nubp2Q9R061 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC11.21□□□□□ -0.61
Nubp2Q9R061 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Nubp2Q9R061 Gm5187-201ENSMUST00000117317 991 ntBASIC11.21□□□□□ -0.61
Nubp2Q9R061 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC11.21□□□□□ -0.61
Nubp2Q9R061 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.21□□□□□ -0.61
Nubp2Q9R061 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nubp2Q9R061 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC11.21□□□□□ -0.61
Nubp2Q9R061 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Nubp2Q9R061 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
Nubp2Q9R061 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nubp2Q9R061 Gm26927-201ENSMUST00000182385 965 ntBASIC11.21□□□□□ -0.61
Nubp2Q9R061 Gm27682-201ENSMUST00000183930 110 ntBASIC11.21□□□□□ -0.61
Nubp2Q9R061 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC11.21□□□□□ -0.61
Nubp2Q9R061 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Nubp2Q9R061 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC11.21□□□□□ -0.61
Nubp2Q9R061 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC11.21□□□□□ -0.61
Nubp2Q9R061 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Nubp2Q9R061 AC134335.2-201ENSMUST00000227660 440 ntBASIC11.21□□□□□ -0.61
Nubp2Q9R061 AC154276.1-201ENSMUST00000228874 1299 ntBASIC11.21□□□□□ -0.61
Nubp2Q9R061 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nubp2Q9R061 Gm10268-201ENSMUST00000085340 555 ntBASIC11.21□□□□□ -0.61
Nubp2Q9R061 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nubp2Q9R061 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Nubp2Q9R061 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Nubp2Q9R061 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nubp2Q9R061 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.62
Nubp2Q9R061 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nubp2Q9R061 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nubp2Q9R061 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Nubp2Q9R061 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nubp2Q9R061 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nubp2Q9R061 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nubp2Q9R061 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.2□□□□□ -0.62
Nubp2Q9R061 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nubp2Q9R061 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nubp2Q9R061 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nubp2Q9R061 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nubp2Q9R061 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nubp2Q9R061 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Nubp2Q9R061 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nubp2Q9R061 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC11.2□□□□□ -0.62
Nubp2Q9R061 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nubp2Q9R061 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nubp2Q9R061 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Nubp2Q9R061 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nubp2Q9R061 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nubp2Q9R061 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.2□□□□□ -0.62
Nubp2Q9R061 Gm2231-201ENSMUST00000125661 612 ntBASIC11.2□□□□□ -0.62
Nubp2Q9R061 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.2□□□□□ -0.62
Nubp2Q9R061 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nubp2Q9R061 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11.2□□□□□ -0.62
Nubp2Q9R061 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC11.2□□□□□ -0.62
Nubp2Q9R061 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
Nubp2Q9R061 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC11.2□□□□□ -0.62
Nubp2Q9R061 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Nubp2Q9R061 Gm42693-201ENSMUST00000196779 631 ntBASIC11.2□□□□□ -0.62
Nubp2Q9R061 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.2□□□□□ -0.62
Nubp2Q9R061 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.2□□□□□ -0.62
Nubp2Q9R061 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Nubp2Q9R061 Gm10146-201ENSMUST00000072739 309 ntBASIC11.2□□□□□ -0.62
Nubp2Q9R061 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Nubp2Q9R061 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nubp2Q9R061 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nubp2Q9R061 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nubp2Q9R061 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nubp2Q9R061 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nubp2Q9R061 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.2□□□□□ -0.62
Nubp2Q9R061 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nubp2Q9R061 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms