Protein–RNA interactions for Protein: Q9JL35

Hmgn5, High mobility group nucleosome-binding domain-containing protein 5, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn5Q9JL35 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn5Q9JL35 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn5Q9JL35 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn5Q9JL35 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn5Q9JL35 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC14.13□□□□□ -0.15
Hmgn5Q9JL35 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn5Q9JL35 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgn5Q9JL35 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgn5Q9JL35 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Hmgn5Q9JL35 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgn5Q9JL35 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgn5Q9JL35 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Hmgn5Q9JL35 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgn5Q9JL35 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.12□□□□□ -0.15
Hmgn5Q9JL35 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgn5Q9JL35 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgn5Q9JL35 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgn5Q9JL35 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Hmgn5Q9JL35 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Hmgn5Q9JL35 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Hmgn5Q9JL35 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgn5Q9JL35 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC14.12□□□□□ -0.15
Hmgn5Q9JL35 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgn5Q9JL35 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Hmgn5Q9JL35 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Hmgn5Q9JL35 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC14.12□□□□□ -0.15
Hmgn5Q9JL35 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC14.12□□□□□ -0.15
Hmgn5Q9JL35 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgn5Q9JL35 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgn5Q9JL35 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgn5Q9JL35 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgn5Q9JL35 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgn5Q9JL35 Gm9797-201ENSMUST00000052902 613 ntBASIC14.12□□□□□ -0.15
Hmgn5Q9JL35 Gm20445-201ENSMUST00000061905 565 ntBASIC14.12□□□□□ -0.15
Hmgn5Q9JL35 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgn5Q9JL35 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgn5Q9JL35 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgn5Q9JL35 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Hmgn5Q9JL35 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgn5Q9JL35 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgn5Q9JL35 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC14.12□□□□□ -0.15
Hmgn5Q9JL35 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgn5Q9JL35 Gm38187-201ENSMUST00000195609 4709 ntBASIC14.12□□□□□ -0.15
Hmgn5Q9JL35 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC14.12□□□□□ -0.15
Hmgn5Q9JL35 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgn5Q9JL35 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgn5Q9JL35 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgn5Q9JL35 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgn5Q9JL35 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgn5Q9JL35 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Hmgn5Q9JL35 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgn5Q9JL35 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgn5Q9JL35 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgn5Q9JL35 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Hmgn5Q9JL35 AC130671.2-201ENSMUST00000227224 1621 ntBASIC14.12□□□□□ -0.15
Hmgn5Q9JL35 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgn5Q9JL35 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC14.11□□□□□ -0.15
Hmgn5Q9JL35 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Hmgn5Q9JL35 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgn5Q9JL35 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgn5Q9JL35 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgn5Q9JL35 Gm14132-201ENSMUST00000117188 1719 ntBASIC14.11□□□□□ -0.15
Hmgn5Q9JL35 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgn5Q9JL35 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.11□□□□□ -0.15
Hmgn5Q9JL35 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Hmgn5Q9JL35 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC14.11□□□□□ -0.15
Hmgn5Q9JL35 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.11□□□□□ -0.15
Hmgn5Q9JL35 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Hmgn5Q9JL35 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgn5Q9JL35 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgn5Q9JL35 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgn5Q9JL35 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Hmgn5Q9JL35 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgn5Q9JL35 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgn5Q9JL35 Gm16372-201ENSMUST00000073088 450 ntBASIC14.11□□□□□ -0.15
Hmgn5Q9JL35 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC14.11□□□□□ -0.15
Hmgn5Q9JL35 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC14.11□□□□□ -0.15
Hmgn5Q9JL35 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC14.11□□□□□ -0.15
Hmgn5Q9JL35 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgn5Q9JL35 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgn5Q9JL35 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgn5Q9JL35 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgn5Q9JL35 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgn5Q9JL35 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgn5Q9JL35 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC14.1□□□□□ -0.15
Hmgn5Q9JL35 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgn5Q9JL35 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Hmgn5Q9JL35 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgn5Q9JL35 AC154639.1-201ENSMUST00000224393 2849 ntBASIC14.1□□□□□ -0.15
Hmgn5Q9JL35 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgn5Q9JL35 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgn5Q9JL35 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgn5Q9JL35 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgn5Q9JL35 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgn5Q9JL35 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgn5Q9JL35 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgn5Q9JL35 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC14.1□□□□□ -0.15
Hmgn5Q9JL35 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC14.1□□□□□ -0.15
Hmgn5Q9JL35 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgn5Q9JL35 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms