Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.1□□□□□ -0.47
Upk3aQ9JKX8 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk3aQ9JKX8 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk3aQ9JKX8 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Upk3aQ9JKX8 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upk3aQ9JKX8 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upk3aQ9JKX8 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upk3aQ9JKX8 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Upk3aQ9JKX8 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upk3aQ9JKX8 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upk3aQ9JKX8 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.09□□□□□ -0.47
Upk3aQ9JKX8 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.09□□□□□ -0.47
Upk3aQ9JKX8 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upk3aQ9JKX8 Gm25214-201ENSMUST00000104573 129 ntBASIC12.09□□□□□ -0.47
Upk3aQ9JKX8 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Upk3aQ9JKX8 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.09□□□□□ -0.47
Upk3aQ9JKX8 Gm9083-201ENSMUST00000120423 819 ntBASIC12.09□□□□□ -0.47
Upk3aQ9JKX8 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upk3aQ9JKX8 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Upk3aQ9JKX8 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upk3aQ9JKX8 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Upk3aQ9JKX8 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.09□□□□□ -0.47
Upk3aQ9JKX8 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.09□□□□□ -0.47
Upk3aQ9JKX8 Gm42937-201ENSMUST00000197360 752 ntBASIC12.09□□□□□ -0.47
Upk3aQ9JKX8 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Upk3aQ9JKX8 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.09□□□□□ -0.47
Upk3aQ9JKX8 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upk3aQ9JKX8 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upk3aQ9JKX8 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upk3aQ9JKX8 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upk3aQ9JKX8 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upk3aQ9JKX8 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Upk3aQ9JKX8 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.09□□□□□ -0.47
Upk3aQ9JKX8 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upk3aQ9JKX8 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Upk3aQ9JKX8 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Upk3aQ9JKX8 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upk3aQ9JKX8 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upk3aQ9JKX8 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upk3aQ9JKX8 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Upk3aQ9JKX8 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Upk3aQ9JKX8 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
Upk3aQ9JKX8 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Upk3aQ9JKX8 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Upk3aQ9JKX8 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Upk3aQ9JKX8 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Upk3aQ9JKX8 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Upk3aQ9JKX8 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Upk3aQ9JKX8 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Upk3aQ9JKX8 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Upk3aQ9JKX8 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.08□□□□□ -0.48
Upk3aQ9JKX8 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Upk3aQ9JKX8 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Upk3aQ9JKX8 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Upk3aQ9JKX8 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Upk3aQ9JKX8 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Upk3aQ9JKX8 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Upk3aQ9JKX8 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.08□□□□□ -0.48
Upk3aQ9JKX8 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Upk3aQ9JKX8 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Upk3aQ9JKX8 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Upk3aQ9JKX8 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Upk3aQ9JKX8 Gm12241-201ENSMUST00000118330 726 ntBASIC12.08□□□□□ -0.48
Upk3aQ9JKX8 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.08□□□□□ -0.48
Upk3aQ9JKX8 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.08□□□□□ -0.48
Upk3aQ9JKX8 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.08□□□□□ -0.48
Upk3aQ9JKX8 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.08□□□□□ -0.48
Upk3aQ9JKX8 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Upk3aQ9JKX8 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.08□□□□□ -0.48
Upk3aQ9JKX8 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.08□□□□□ -0.48
Upk3aQ9JKX8 Gm9368-201ENSMUST00000219348 831 ntBASIC12.08□□□□□ -0.48
Upk3aQ9JKX8 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Upk3aQ9JKX8 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Upk3aQ9JKX8 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Upk3aQ9JKX8 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Upk3aQ9JKX8 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Upk3aQ9JKX8 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Upk3aQ9JKX8 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Upk3aQ9JKX8 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Upk3aQ9JKX8 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Upk3aQ9JKX8 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Upk3aQ9JKX8 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.08□□□□□ -0.48
Upk3aQ9JKX8 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Upk3aQ9JKX8 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Upk3aQ9JKX8 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Upk3aQ9JKX8 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Upk3aQ9JKX8 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Upk3aQ9JKX8 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Upk3aQ9JKX8 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Upk3aQ9JKX8 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Upk3aQ9JKX8 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Upk3aQ9JKX8 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.07□□□□□ -0.48
Upk3aQ9JKX8 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Upk3aQ9JKX8 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Upk3aQ9JKX8 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Upk3aQ9JKX8 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Upk3aQ9JKX8 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Upk3aQ9JKX8 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Upk3aQ9JKX8 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Upk3aQ9JKX8 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms