Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Gm17831-201ENSMUST00000205579 900 ntBASIC12.88□□□□□ -0.35
Nkx2-4Q9EQM3 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC12.88□□□□□ -0.35
Nkx2-4Q9EQM3 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-4Q9EQM3 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-4Q9EQM3 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-4Q9EQM3 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Nkx2-4Q9EQM3 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-4Q9EQM3 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Nkx2-4Q9EQM3 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-4Q9EQM3 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-4Q9EQM3 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-4Q9EQM3 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-4Q9EQM3 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-4Q9EQM3 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-4Q9EQM3 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-4Q9EQM3 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-4Q9EQM3 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-4Q9EQM3 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-4Q9EQM3 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-4Q9EQM3 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-4Q9EQM3 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.88□□□□□ -0.35
Nkx2-4Q9EQM3 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-4Q9EQM3 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-4Q9EQM3 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-4Q9EQM3 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-4Q9EQM3 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.87□□□□□ -0.35
Nkx2-4Q9EQM3 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-4Q9EQM3 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-4Q9EQM3 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-4Q9EQM3 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-4Q9EQM3 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Nkx2-4Q9EQM3 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-4Q9EQM3 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-4Q9EQM3 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-4Q9EQM3 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-4Q9EQM3 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-4Q9EQM3 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.87□□□□□ -0.35
Nkx2-4Q9EQM3 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.87□□□□□ -0.35
Nkx2-4Q9EQM3 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-4Q9EQM3 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-4Q9EQM3 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC12.87□□□□□ -0.35
Nkx2-4Q9EQM3 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC12.87□□□□□ -0.35
Nkx2-4Q9EQM3 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.87□□□□□ -0.35
Nkx2-4Q9EQM3 Gm12899-201ENSMUST00000120565 551 ntBASIC12.87□□□□□ -0.35
Nkx2-4Q9EQM3 Gm14585-201ENSMUST00000120713 634 ntBASIC12.87□□□□□ -0.35
Nkx2-4Q9EQM3 Gm8199-201ENSMUST00000121323 823 ntBASIC12.87□□□□□ -0.35
Nkx2-4Q9EQM3 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-4Q9EQM3 Gm22144-201ENSMUST00000157402 102 ntBASIC12.87□□□□□ -0.35
Nkx2-4Q9EQM3 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-4Q9EQM3 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.87□□□□□ -0.35
Nkx2-4Q9EQM3 Gm27910-201ENSMUST00000185004 107 ntBASIC12.87□□□□□ -0.35
Nkx2-4Q9EQM3 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-4Q9EQM3 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-4Q9EQM3 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC12.87□□□□□ -0.35
Nkx2-4Q9EQM3 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-4Q9EQM3 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-4Q9EQM3 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC12.87□□□□□ -0.35
Nkx2-4Q9EQM3 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-4Q9EQM3 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.87□□□□□ -0.35
Nkx2-4Q9EQM3 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.87□□□□□ -0.35
Nkx2-4Q9EQM3 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-4Q9EQM3 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-4Q9EQM3 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-4Q9EQM3 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.87□□□□□ -0.35
Nkx2-4Q9EQM3 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-4Q9EQM3 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-4Q9EQM3 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.87□□□□□ -0.35
Nkx2-4Q9EQM3 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-4Q9EQM3 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Nkx2-4Q9EQM3 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-4Q9EQM3 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-4Q9EQM3 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-4Q9EQM3 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-4Q9EQM3 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.87□□□□□ -0.35
Nkx2-4Q9EQM3 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Nkx2-4Q9EQM3 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Nkx2-4Q9EQM3 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx2-4Q9EQM3 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx2-4Q9EQM3 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx2-4Q9EQM3 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx2-4Q9EQM3 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx2-4Q9EQM3 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx2-4Q9EQM3 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx2-4Q9EQM3 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx2-4Q9EQM3 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Nkx2-4Q9EQM3 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx2-4Q9EQM3 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Nkx2-4Q9EQM3 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.86□□□□□ -0.35
Nkx2-4Q9EQM3 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx2-4Q9EQM3 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx2-4Q9EQM3 Gm11451-201ENSMUST00000118946 630 ntBASIC12.86□□□□□ -0.35
Nkx2-4Q9EQM3 Gm11956-201ENSMUST00000119525 512 ntBASIC12.86□□□□□ -0.35
Nkx2-4Q9EQM3 Gm13182-201ENSMUST00000122241 312 ntBASIC12.86□□□□□ -0.35
Nkx2-4Q9EQM3 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC12.86□□□□□ -0.35
Nkx2-4Q9EQM3 Gm23771-201ENSMUST00000178702 110 ntBASIC12.86□□□□□ -0.35
Nkx2-4Q9EQM3 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC12.86□□□□□ -0.35
Nkx2-4Q9EQM3 Gm6867-201ENSMUST00000219165 425 ntBASIC12.86□□□□□ -0.35
Nkx2-4Q9EQM3 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx2-4Q9EQM3 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx2-4Q9EQM3 Gm5455-201ENSMUST00000058710 715 ntBASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms