Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Gm8617-201ENSMUST00000118796 2222 ntBASIC15□□□□□ -0.01
Stag1Q9D3E6 Gm3052-202ENSMUST00000188254 2224 ntBASIC15□□□□□ -0.01
Stag1Q9D3E6 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC15□□□□□ -0.01
Stag1Q9D3E6 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Stag1Q9D3E6 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Stag1Q9D3E6 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Stag1Q9D3E6 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Stag1Q9D3E6 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Stag1Q9D3E6 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Stag1Q9D3E6 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Stag1Q9D3E6 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Stag1Q9D3E6 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Stag1Q9D3E6 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Stag1Q9D3E6 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Stag1Q9D3E6 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
Stag1Q9D3E6 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
Stag1Q9D3E6 Rmrp-201ENSMUST00000157463 271 ntBASIC14.99□□□□□ -0.01
Stag1Q9D3E6 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Stag1Q9D3E6 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC14.99□□□□□ -0.01
Stag1Q9D3E6 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC14.99□□□□□ -0.01
Stag1Q9D3E6 Gm45433-201ENSMUST00000209386 247 ntBASIC14.99□□□□□ -0.01
Stag1Q9D3E6 AL732506.1-201ENSMUST00000226420 281 ntBASIC14.99□□□□□ -0.01
Stag1Q9D3E6 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Stag1Q9D3E6 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Stag1Q9D3E6 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC14.99□□□□□ -0.01
Stag1Q9D3E6 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Stag1Q9D3E6 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Stag1Q9D3E6 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC14.99□□□□□ -0.01
Stag1Q9D3E6 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC14.99□□□□□ -0.01
Stag1Q9D3E6 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Stag1Q9D3E6 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Stag1Q9D3E6 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Stag1Q9D3E6 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Stag1Q9D3E6 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Stag1Q9D3E6 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Stag1Q9D3E6 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Stag1Q9D3E6 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Stag1Q9D3E6 CU062626.3-201ENSMUST00000225522 1411 ntBASIC14.99□□□□□ -0.01
Stag1Q9D3E6 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Stag1Q9D3E6 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Stag1Q9D3E6 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Stag1Q9D3E6 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC14.99□□□□□ -0.01
Stag1Q9D3E6 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
Stag1Q9D3E6 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Stag1Q9D3E6 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Stag1Q9D3E6 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Stag1Q9D3E6 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Stag1Q9D3E6 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC14.98□□□□□ -0.01
Stag1Q9D3E6 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Stag1Q9D3E6 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Stag1Q9D3E6 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Stag1Q9D3E6 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Stag1Q9D3E6 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Stag1Q9D3E6 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC14.98□□□□□ -0.01
Stag1Q9D3E6 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC14.98□□□□□ -0.01
Stag1Q9D3E6 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC14.98□□□□□ -0.01
Stag1Q9D3E6 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Stag1Q9D3E6 Gm25732-201ENSMUST00000175168 60 ntBASIC14.98□□□□□ -0.01
Stag1Q9D3E6 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC14.98□□□□□ -0.01
Stag1Q9D3E6 Gm42937-201ENSMUST00000197360 752 ntBASIC14.98□□□□□ -0.01
Stag1Q9D3E6 Aprt-ps-201ENSMUST00000212311 505 ntBASIC14.98□□□□□ -0.01
Stag1Q9D3E6 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC14.98□□□□□ -0.01
Stag1Q9D3E6 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Stag1Q9D3E6 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Stag1Q9D3E6 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Stag1Q9D3E6 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Stag1Q9D3E6 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Stag1Q9D3E6 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Stag1Q9D3E6 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Stag1Q9D3E6 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Stag1Q9D3E6 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Stag1Q9D3E6 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Stag1Q9D3E6 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Stag1Q9D3E6 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Stag1Q9D3E6 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Stag1Q9D3E6 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Stag1Q9D3E6 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Stag1Q9D3E6 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC14.98□□□□□ -0.01
Stag1Q9D3E6 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.98□□□□□ -0.01
Stag1Q9D3E6 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Stag1Q9D3E6 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Stag1Q9D3E6 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Stag1Q9D3E6 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Stag1Q9D3E6 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Stag1Q9D3E6 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Stag1Q9D3E6 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC14.97□□□□□ -0.01
Stag1Q9D3E6 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Stag1Q9D3E6 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Stag1Q9D3E6 Mbnl2-204ENSMUST00000227012 2390 ntBASIC14.97□□□□□ -0.01
Stag1Q9D3E6 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Stag1Q9D3E6 Ssr1-203ENSMUST00000225246 1825 ntBASIC14.97□□□□□ -0.01
Stag1Q9D3E6 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Stag1Q9D3E6 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Stag1Q9D3E6 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Stag1Q9D3E6 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.97□□□□□ -0.01
Stag1Q9D3E6 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Stag1Q9D3E6 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Stag1Q9D3E6 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC14.97□□□□□ -0.01
Stag1Q9D3E6 Gm12566-201ENSMUST00000121479 359 ntBASIC14.97□□□□□ -0.01
Stag1Q9D3E6 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms