Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Upk1aQ9D132 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Upk1aQ9D132 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Upk1aQ9D132 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Upk1aQ9D132 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Upk1aQ9D132 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Upk1aQ9D132 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Upk1aQ9D132 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.9□□□□□ -0.5
Upk1aQ9D132 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC11.9□□□□□ -0.5
Upk1aQ9D132 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Upk1aQ9D132 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.9□□□□□ -0.5
Upk1aQ9D132 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.9□□□□□ -0.5
Upk1aQ9D132 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Upk1aQ9D132 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Upk1aQ9D132 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.9□□□□□ -0.5
Upk1aQ9D132 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk1aQ9D132 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk1aQ9D132 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.89□□□□□ -0.51
Upk1aQ9D132 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk1aQ9D132 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk1aQ9D132 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk1aQ9D132 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk1aQ9D132 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk1aQ9D132 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Upk1aQ9D132 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk1aQ9D132 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Upk1aQ9D132 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk1aQ9D132 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Upk1aQ9D132 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk1aQ9D132 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk1aQ9D132 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Upk1aQ9D132 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk1aQ9D132 Gm12384-201ENSMUST00000119228 919 ntBASIC11.89□□□□□ -0.51
Upk1aQ9D132 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk1aQ9D132 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Upk1aQ9D132 Gm6152-201ENSMUST00000151704 340 ntBASIC11.89□□□□□ -0.51
Upk1aQ9D132 Gm2495-201ENSMUST00000191160 466 ntBASIC11.89□□□□□ -0.51
Upk1aQ9D132 AL593843.1-201ENSMUST00000195891 145 ntBASIC11.89□□□□□ -0.51
Upk1aQ9D132 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Upk1aQ9D132 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC11.89□□□□□ -0.51
Upk1aQ9D132 Gm18473-201ENSMUST00000220543 868 ntBASIC11.89□□□□□ -0.51
Upk1aQ9D132 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk1aQ9D132 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk1aQ9D132 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk1aQ9D132 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Upk1aQ9D132 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC11.89□□□□□ -0.51
Upk1aQ9D132 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Upk1aQ9D132 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk1aQ9D132 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.89□□□□□ -0.51
Upk1aQ9D132 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk1aQ9D132 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk1aQ9D132 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk1aQ9D132 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk1aQ9D132 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Upk1aQ9D132 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.89□□□□□ -0.51
Upk1aQ9D132 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk1aQ9D132 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk1aQ9D132 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk1aQ9D132 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Upk1aQ9D132 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC11.88□□□□□ -0.51
Upk1aQ9D132 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Upk1aQ9D132 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Upk1aQ9D132 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Upk1aQ9D132 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Upk1aQ9D132 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Upk1aQ9D132 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Upk1aQ9D132 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Upk1aQ9D132 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Upk1aQ9D132 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Upk1aQ9D132 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Upk1aQ9D132 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Upk1aQ9D132 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Upk1aQ9D132 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.88□□□□□ -0.51
Upk1aQ9D132 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Upk1aQ9D132 Snord83b-201ENSMUST00000104546 94 ntBASIC11.88□□□□□ -0.51
Upk1aQ9D132 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Upk1aQ9D132 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Upk1aQ9D132 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Upk1aQ9D132 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Upk1aQ9D132 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC11.88□□□□□ -0.51
Upk1aQ9D132 Gm22121-201ENSMUST00000175148 54 ntBASIC11.88□□□□□ -0.51
Upk1aQ9D132 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Upk1aQ9D132 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Upk1aQ9D132 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC11.88□□□□□ -0.51
Upk1aQ9D132 Gm27437-201ENSMUST00000183429 107 ntBASIC11.88□□□□□ -0.51
Upk1aQ9D132 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC11.88□□□□□ -0.51
Upk1aQ9D132 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.88□□□□□ -0.51
Upk1aQ9D132 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Upk1aQ9D132 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Upk1aQ9D132 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Upk1aQ9D132 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Upk1aQ9D132 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Upk1aQ9D132 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Upk1aQ9D132 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Upk1aQ9D132 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Upk1aQ9D132 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Upk1aQ9D132 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Upk1aQ9D132 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Upk1aQ9D132 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Upk1aQ9D132 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms