Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.11□□□□□ -0.31
Rnf135Q9CWS1 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.11□□□□□ -0.31
Rnf135Q9CWS1 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13.11□□□□□ -0.31
Rnf135Q9CWS1 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC13.11□□□□□ -0.31
Rnf135Q9CWS1 Gm9257-201ENSMUST00000221254 232 ntBASIC13.11□□□□□ -0.31
Rnf135Q9CWS1 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf135Q9CWS1 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf135Q9CWS1 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Rnf135Q9CWS1 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Rnf135Q9CWS1 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf135Q9CWS1 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC13.11□□□□□ -0.31
Rnf135Q9CWS1 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Rnf135Q9CWS1 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Rnf135Q9CWS1 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf135Q9CWS1 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Rnf135Q9CWS1 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf135Q9CWS1 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf135Q9CWS1 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf135Q9CWS1 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf135Q9CWS1 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf135Q9CWS1 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf135Q9CWS1 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.1□□□□□ -0.31
Rnf135Q9CWS1 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Rnf135Q9CWS1 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf135Q9CWS1 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC13.1□□□□□ -0.31
Rnf135Q9CWS1 Gm36970-201ENSMUST00000193688 1859 ntBASIC13.1□□□□□ -0.31
Rnf135Q9CWS1 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf135Q9CWS1 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Rnf135Q9CWS1 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Rnf135Q9CWS1 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf135Q9CWS1 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf135Q9CWS1 CT025624.1-201ENSMUST00000224007 2700 ntBASIC13.1□□□□□ -0.31
Rnf135Q9CWS1 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf135Q9CWS1 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf135Q9CWS1 Gm12203-201ENSMUST00000118235 598 ntBASIC13.1□□□□□ -0.31
Rnf135Q9CWS1 Gm12209-201ENSMUST00000120089 596 ntBASIC13.1□□□□□ -0.31
Rnf135Q9CWS1 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Rnf135Q9CWS1 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.1□□□□□ -0.31
Rnf135Q9CWS1 Gm22121-201ENSMUST00000175148 54 ntBASIC13.1□□□□□ -0.31
Rnf135Q9CWS1 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC13.1□□□□□ -0.31
Rnf135Q9CWS1 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC13.1□□□□□ -0.31
Rnf135Q9CWS1 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC13.1□□□□□ -0.31
Rnf135Q9CWS1 Gm6013-201ENSMUST00000212264 699 ntBASIC13.1□□□□□ -0.31
Rnf135Q9CWS1 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC13.1□□□□□ -0.31
Rnf135Q9CWS1 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf135Q9CWS1 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Rnf135Q9CWS1 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Rnf135Q9CWS1 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf135Q9CWS1 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf135Q9CWS1 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf135Q9CWS1 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf135Q9CWS1 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf135Q9CWS1 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf135Q9CWS1 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf135Q9CWS1 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf135Q9CWS1 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf135Q9CWS1 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf135Q9CWS1 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf135Q9CWS1 Snord83b-201ENSMUST00000104546 94 ntBASIC13.09□□□□□ -0.31
Rnf135Q9CWS1 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC13.09□□□□□ -0.31
Rnf135Q9CWS1 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.09□□□□□ -0.31
Rnf135Q9CWS1 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Rnf135Q9CWS1 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Rnf135Q9CWS1 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf135Q9CWS1 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13.09□□□□□ -0.31
Rnf135Q9CWS1 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC13.09□□□□□ -0.31
Rnf135Q9CWS1 Gm27514-201ENSMUST00000183692 110 ntBASIC13.09□□□□□ -0.31
Rnf135Q9CWS1 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf135Q9CWS1 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf135Q9CWS1 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf135Q9CWS1 AC155237.1-201ENSMUST00000226196 1279 ntBASIC13.09□□□□□ -0.31
Rnf135Q9CWS1 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC13.09□□□□□ -0.31
Rnf135Q9CWS1 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf135Q9CWS1 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC13.09□□□□□ -0.31
Rnf135Q9CWS1 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC13.09□□□□□ -0.31
Rnf135Q9CWS1 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Rnf135Q9CWS1 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf135Q9CWS1 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf135Q9CWS1 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC13.09□□□□□ -0.31
Rnf135Q9CWS1 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf135Q9CWS1 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC13.09□□□□□ -0.31
Rnf135Q9CWS1 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Rnf135Q9CWS1 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Rnf135Q9CWS1 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf135Q9CWS1 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf135Q9CWS1 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf135Q9CWS1 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Rnf135Q9CWS1 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf135Q9CWS1 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Rnf135Q9CWS1 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
Rnf135Q9CWS1 Gm12846-201ENSMUST00000120431 1373 ntBASIC13.08□□□□□ -0.31
Rnf135Q9CWS1 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.08□□□□□ -0.31
Rnf135Q9CWS1 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Rnf135Q9CWS1 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf135Q9CWS1 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf135Q9CWS1 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf135Q9CWS1 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf135Q9CWS1 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf135Q9CWS1 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Rnf135Q9CWS1 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms