Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim33Q99PP7 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Trim33Q99PP7 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trim33Q99PP7 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim33Q99PP7 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.56□□□□□ -0.4
Trim33Q99PP7 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim33Q99PP7 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trim33Q99PP7 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim33Q99PP7 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.56□□□□□ -0.4
Trim33Q99PP7 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim33Q99PP7 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim33Q99PP7 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim33Q99PP7 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim33Q99PP7 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim33Q99PP7 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trim33Q99PP7 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim33Q99PP7 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.56□□□□□ -0.4
Trim33Q99PP7 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.56□□□□□ -0.4
Trim33Q99PP7 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim33Q99PP7 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim33Q99PP7 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.56□□□□□ -0.4
Trim33Q99PP7 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim33Q99PP7 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim33Q99PP7 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim33Q99PP7 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Trim33Q99PP7 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim33Q99PP7 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trim33Q99PP7 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.56□□□□□ -0.4
Trim33Q99PP7 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim33Q99PP7 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim33Q99PP7 Gm15271-201ENSMUST00000134627 2110 ntTSL 5 BASIC12.56□□□□□ -0.4
Trim33Q99PP7 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trim33Q99PP7 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim33Q99PP7 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim33Q99PP7 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim33Q99PP7 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.56□□□□□ -0.4
Trim33Q99PP7 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim33Q99PP7 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim33Q99PP7 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim33Q99PP7 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim33Q99PP7 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim33Q99PP7 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim33Q99PP7 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.55□□□□□ -0.4
Trim33Q99PP7 Snord83b-201ENSMUST00000104546 94 ntBASIC12.55□□□□□ -0.4
Trim33Q99PP7 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim33Q99PP7 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim33Q99PP7 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim33Q99PP7 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trim33Q99PP7 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim33Q99PP7 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim33Q99PP7 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim33Q99PP7 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim33Q99PP7 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim33Q99PP7 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim33Q99PP7 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim33Q99PP7 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim33Q99PP7 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim33Q99PP7 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim33Q99PP7 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Trim33Q99PP7 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.55□□□□□ -0.4
Trim33Q99PP7 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim33Q99PP7 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim33Q99PP7 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim33Q99PP7 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.54□□□□□ -0.4
Trim33Q99PP7 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trim33Q99PP7 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim33Q99PP7 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim33Q99PP7 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim33Q99PP7 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim33Q99PP7 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.54□□□□□ -0.4
Trim33Q99PP7 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim33Q99PP7 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim33Q99PP7 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trim33Q99PP7 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trim33Q99PP7 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim33Q99PP7 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.54□□□□□ -0.4
Trim33Q99PP7 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trim33Q99PP7 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim33Q99PP7 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim33Q99PP7 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.54□□□□□ -0.4
Trim33Q99PP7 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim33Q99PP7 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trim33Q99PP7 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim33Q99PP7 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Trim33Q99PP7 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.54□□□□□ -0.4
Trim33Q99PP7 Snora78-201ENSMUST00000158630 128 ntBASIC12.54□□□□□ -0.4
Trim33Q99PP7 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim33Q99PP7 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.54□□□□□ -0.4
Trim33Q99PP7 Mir7085-201ENSMUST00000184353 66 ntBASIC12.54□□□□□ -0.4
Trim33Q99PP7 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.54□□□□□ -0.4
Trim33Q99PP7 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim33Q99PP7 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.54□□□□□ -0.4
Trim33Q99PP7 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim33Q99PP7 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim33Q99PP7 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim33Q99PP7 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trim33Q99PP7 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim33Q99PP7 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim33Q99PP7 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim33Q99PP7 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 1413.7 ms