Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Gm16397-201ENSMUST00000122201 494 ntBASIC12.47□□□□□ -0.41
Vsx1Q91V10 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC12.47□□□□□ -0.41
Vsx1Q91V10 Gm19353-201ENSMUST00000184561 445 ntBASIC12.47□□□□□ -0.41
Vsx1Q91V10 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.47□□□□□ -0.41
Vsx1Q91V10 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC12.47□□□□□ -0.41
Vsx1Q91V10 Gm9540-201ENSMUST00000188230 478 ntBASIC12.47□□□□□ -0.41
Vsx1Q91V10 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC12.47□□□□□ -0.41
Vsx1Q91V10 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.47□□□□□ -0.41
Vsx1Q91V10 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vsx1Q91V10 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC12.47□□□□□ -0.41
Vsx1Q91V10 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vsx1Q91V10 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vsx1Q91V10 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vsx1Q91V10 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vsx1Q91V10 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vsx1Q91V10 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Vsx1Q91V10 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vsx1Q91V10 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vsx1Q91V10 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Vsx1Q91V10 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vsx1Q91V10 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vsx1Q91V10 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vsx1Q91V10 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vsx1Q91V10 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.47□□□□□ -0.41
Vsx1Q91V10 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Vsx1Q91V10 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vsx1Q91V10 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vsx1Q91V10 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Vsx1Q91V10 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vsx1Q91V10 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.46□□□□□ -0.41
Vsx1Q91V10 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Vsx1Q91V10 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Vsx1Q91V10 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vsx1Q91V10 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vsx1Q91V10 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vsx1Q91V10 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Vsx1Q91V10 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Vsx1Q91V10 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Vsx1Q91V10 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vsx1Q91V10 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vsx1Q91V10 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vsx1Q91V10 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vsx1Q91V10 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vsx1Q91V10 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.46□□□□□ -0.41
Vsx1Q91V10 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vsx1Q91V10 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Vsx1Q91V10 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Vsx1Q91V10 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.46□□□□□ -0.41
Vsx1Q91V10 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.46□□□□□ -0.41
Vsx1Q91V10 Gm24845-201ENSMUST00000158034 109 ntBASIC12.46□□□□□ -0.41
Vsx1Q91V10 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Vsx1Q91V10 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.46□□□□□ -0.41
Vsx1Q91V10 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.46□□□□□ -0.41
Vsx1Q91V10 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Vsx1Q91V10 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Vsx1Q91V10 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.46□□□□□ -0.41
Vsx1Q91V10 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Vsx1Q91V10 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Vsx1Q91V10 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.46□□□□□ -0.41
Vsx1Q91V10 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.46□□□□□ -0.41
Vsx1Q91V10 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Vsx1Q91V10 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC12.46□□□□□ -0.41
Vsx1Q91V10 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vsx1Q91V10 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vsx1Q91V10 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.46□□□□□ -0.41
Vsx1Q91V10 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vsx1Q91V10 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vsx1Q91V10 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vsx1Q91V10 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.46□□□□□ -0.42
Vsx1Q91V10 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vsx1Q91V10 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC12.46□□□□□ -0.42
Vsx1Q91V10 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vsx1Q91V10 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.46□□□□□ -0.42
Vsx1Q91V10 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vsx1Q91V10 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vsx1Q91V10 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vsx1Q91V10 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Vsx1Q91V10 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.45□□□□□ -0.42
Vsx1Q91V10 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vsx1Q91V10 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Vsx1Q91V10 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.45□□□□□ -0.42
Vsx1Q91V10 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.45□□□□□ -0.42
Vsx1Q91V10 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Vsx1Q91V10 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC12.45□□□□□ -0.42
Vsx1Q91V10 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC12.45□□□□□ -0.42
Vsx1Q91V10 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.45□□□□□ -0.42
Vsx1Q91V10 Gm6963-201ENSMUST00000147879 379 ntBASIC12.45□□□□□ -0.42
Vsx1Q91V10 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.45□□□□□ -0.42
Vsx1Q91V10 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC12.45□□□□□ -0.42
Vsx1Q91V10 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC12.45□□□□□ -0.42
Vsx1Q91V10 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC12.45□□□□□ -0.42
Vsx1Q91V10 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.45□□□□□ -0.42
Vsx1Q91V10 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Vsx1Q91V10 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.45□□□□□ -0.42
Vsx1Q91V10 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12.45□□□□□ -0.42
Vsx1Q91V10 AC166992.1-201ENSMUST00000216356 565 ntBASIC12.45□□□□□ -0.42
Vsx1Q91V10 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.45□□□□□ -0.42
Vsx1Q91V10 Gm10179-201ENSMUST00000086233 688 ntBASIC12.45□□□□□ -0.42
Vsx1Q91V10 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Vsx1Q91V10 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 89 ms