Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ndc1Q8VCB1 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ndc1Q8VCB1 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ndc1Q8VCB1 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.9□□□□□ -0.5
Ndc1Q8VCB1 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.9□□□□□ -0.5
Ndc1Q8VCB1 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ndc1Q8VCB1 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ndc1Q8VCB1 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.9□□□□□ -0.5
Ndc1Q8VCB1 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ndc1Q8VCB1 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.9□□□□□ -0.5
Ndc1Q8VCB1 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ndc1Q8VCB1 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ndc1Q8VCB1 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ndc1Q8VCB1 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ndc1Q8VCB1 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ndc1Q8VCB1 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ndc1Q8VCB1 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ndc1Q8VCB1 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ndc1Q8VCB1 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ndc1Q8VCB1 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ndc1Q8VCB1 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ndc1Q8VCB1 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Ndc1Q8VCB1 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ndc1Q8VCB1 Gm13492-201ENSMUST00000119772 665 ntBASIC11.9□□□□□ -0.5
Ndc1Q8VCB1 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Ndc1Q8VCB1 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ndc1Q8VCB1 Gm26956-201ENSMUST00000182176 986 ntBASIC11.9□□□□□ -0.5
Ndc1Q8VCB1 Gm38092-201ENSMUST00000195600 653 ntBASIC11.9□□□□□ -0.5
Ndc1Q8VCB1 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ndc1Q8VCB1 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.9□□□□□ -0.5
Ndc1Q8VCB1 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ndc1Q8VCB1 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.9□□□□□ -0.5
Ndc1Q8VCB1 Gm30285-201ENSMUST00000214614 422 ntBASIC11.9□□□□□ -0.5
Ndc1Q8VCB1 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.9□□□□□ -0.5
Ndc1Q8VCB1 AC093022.1-201ENSMUST00000226949 1072 ntBASIC11.9□□□□□ -0.5
Ndc1Q8VCB1 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ndc1Q8VCB1 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ndc1Q8VCB1 Gm22058-201ENSMUST00000083393 310 ntBASIC11.9□□□□□ -0.5
Ndc1Q8VCB1 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ndc1Q8VCB1 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC11.9□□□□□ -0.5
Ndc1Q8VCB1 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ndc1Q8VCB1 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ndc1Q8VCB1 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ndc1Q8VCB1 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC11.9□□□□□ -0.5
Ndc1Q8VCB1 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ndc1Q8VCB1 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Ndc1Q8VCB1 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Ndc1Q8VCB1 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ndc1Q8VCB1 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ndc1Q8VCB1 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Ndc1Q8VCB1 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ndc1Q8VCB1 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Ndc1Q8VCB1 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Ndc1Q8VCB1 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.9□□□□□ -0.51
Ndc1Q8VCB1 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ndc1Q8VCB1 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Ndc1Q8VCB1 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ndc1Q8VCB1 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ndc1Q8VCB1 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ndc1Q8VCB1 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.89□□□□□ -0.51
Ndc1Q8VCB1 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.89□□□□□ -0.51
Ndc1Q8VCB1 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ndc1Q8VCB1 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ndc1Q8VCB1 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Ndc1Q8VCB1 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ndc1Q8VCB1 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Ndc1Q8VCB1 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.89□□□□□ -0.51
Ndc1Q8VCB1 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ndc1Q8VCB1 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
Ndc1Q8VCB1 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ndc1Q8VCB1 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ndc1Q8VCB1 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ndc1Q8VCB1 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.89□□□□□ -0.51
Ndc1Q8VCB1 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ndc1Q8VCB1 Gm12291-201ENSMUST00000121627 311 ntBASIC11.89□□□□□ -0.51
Ndc1Q8VCB1 Gm12749-201ENSMUST00000122138 1159 ntBASIC11.89□□□□□ -0.51
Ndc1Q8VCB1 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ndc1Q8VCB1 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Ndc1Q8VCB1 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.89□□□□□ -0.51
Ndc1Q8VCB1 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.89□□□□□ -0.51
Ndc1Q8VCB1 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.89□□□□□ -0.51
Ndc1Q8VCB1 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ndc1Q8VCB1 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ndc1Q8VCB1 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Ndc1Q8VCB1 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.89□□□□□ -0.51
Ndc1Q8VCB1 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Ndc1Q8VCB1 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ndc1Q8VCB1 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.89□□□□□ -0.51
Ndc1Q8VCB1 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ndc1Q8VCB1 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.89□□□□□ -0.51
Ndc1Q8VCB1 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ndc1Q8VCB1 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ndc1Q8VCB1 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ndc1Q8VCB1 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ndc1Q8VCB1 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ndc1Q8VCB1 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ndc1Q8VCB1 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ndc1Q8VCB1 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ndc1Q8VCB1 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ndc1Q8VCB1 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms