Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cchcr1Q8K2I2 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Cchcr1Q8K2I2 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cchcr1Q8K2I2 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cchcr1Q8K2I2 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cchcr1Q8K2I2 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cchcr1Q8K2I2 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cchcr1Q8K2I2 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cchcr1Q8K2I2 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cchcr1Q8K2I2 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cchcr1Q8K2I2 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Cchcr1Q8K2I2 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC14.88□□□□□ -0.03
Cchcr1Q8K2I2 Gm24231-201ENSMUST00000104315 133 ntBASIC14.88□□□□□ -0.03
Cchcr1Q8K2I2 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC14.88□□□□□ -0.03
Cchcr1Q8K2I2 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cchcr1Q8K2I2 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC14.88□□□□□ -0.03
Cchcr1Q8K2I2 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14.88□□□□□ -0.03
Cchcr1Q8K2I2 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC14.88□□□□□ -0.03
Cchcr1Q8K2I2 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cchcr1Q8K2I2 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Cchcr1Q8K2I2 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cchcr1Q8K2I2 Gm26927-201ENSMUST00000182385 965 ntBASIC14.88□□□□□ -0.03
Cchcr1Q8K2I2 Gm27839-201ENSMUST00000184242 106 ntBASIC14.88□□□□□ -0.03
Cchcr1Q8K2I2 Gm29649-201ENSMUST00000185649 419 ntBASIC14.88□□□□□ -0.03
Cchcr1Q8K2I2 CT573086.2-201ENSMUST00000227277 4992 ntBASIC14.88□□□□□ -0.03
Cchcr1Q8K2I2 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cchcr1Q8K2I2 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cchcr1Q8K2I2 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cchcr1Q8K2I2 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cchcr1Q8K2I2 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cchcr1Q8K2I2 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cchcr1Q8K2I2 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC14.88□□□□□ -0.03
Cchcr1Q8K2I2 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC14.88□□□□□ -0.03
Cchcr1Q8K2I2 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cchcr1Q8K2I2 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cchcr1Q8K2I2 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Cchcr1Q8K2I2 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cchcr1Q8K2I2 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC14.87□□□□□ -0.03
Cchcr1Q8K2I2 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cchcr1Q8K2I2 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cchcr1Q8K2I2 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cchcr1Q8K2I2 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cchcr1Q8K2I2 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cchcr1Q8K2I2 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC14.87□□□□□ -0.03
Cchcr1Q8K2I2 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cchcr1Q8K2I2 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Cchcr1Q8K2I2 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC14.87□□□□□ -0.03
Cchcr1Q8K2I2 Gm27390-201ENSMUST00000184516 176 ntBASIC14.87□□□□□ -0.03
Cchcr1Q8K2I2 Gm38092-201ENSMUST00000195600 653 ntBASIC14.87□□□□□ -0.03
Cchcr1Q8K2I2 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC14.87□□□□□ -0.03
Cchcr1Q8K2I2 Gm7561-201ENSMUST00000211203 886 ntBASIC14.87□□□□□ -0.03
Cchcr1Q8K2I2 Gm5035-201ENSMUST00000215581 927 ntBASIC14.87□□□□□ -0.03
Cchcr1Q8K2I2 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cchcr1Q8K2I2 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cchcr1Q8K2I2 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC14.87□□□□□ -0.03
Cchcr1Q8K2I2 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC14.87□□□□□ -0.03
Cchcr1Q8K2I2 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cchcr1Q8K2I2 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cchcr1Q8K2I2 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Cchcr1Q8K2I2 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cchcr1Q8K2I2 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cchcr1Q8K2I2 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cchcr1Q8K2I2 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC14.87□□□□□ -0.03
Cchcr1Q8K2I2 AC157950.1-201ENSMUST00000217561 2168 ntBASIC14.87□□□□□ -0.03
Cchcr1Q8K2I2 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cchcr1Q8K2I2 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cchcr1Q8K2I2 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cchcr1Q8K2I2 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC14.86□□□□□ -0.03
Cchcr1Q8K2I2 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cchcr1Q8K2I2 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cchcr1Q8K2I2 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cchcr1Q8K2I2 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cchcr1Q8K2I2 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Cchcr1Q8K2I2 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Cchcr1Q8K2I2 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC14.86□□□□□ -0.03
Cchcr1Q8K2I2 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
Cchcr1Q8K2I2 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cchcr1Q8K2I2 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Cchcr1Q8K2I2 Gm13492-201ENSMUST00000119772 665 ntBASIC14.86□□□□□ -0.03
Cchcr1Q8K2I2 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Cchcr1Q8K2I2 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cchcr1Q8K2I2 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cchcr1Q8K2I2 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.86□□□□□ -0.03
Cchcr1Q8K2I2 AC069562.3-201ENSMUST00000225387 587 ntBASIC14.86□□□□□ -0.03
Cchcr1Q8K2I2 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cchcr1Q8K2I2 Gm6091-201ENSMUST00000098307 165 ntBASIC14.86□□□□□ -0.03
Cchcr1Q8K2I2 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cchcr1Q8K2I2 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Cchcr1Q8K2I2 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Cchcr1Q8K2I2 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Cchcr1Q8K2I2 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cchcr1Q8K2I2 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cchcr1Q8K2I2 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cchcr1Q8K2I2 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cchcr1Q8K2I2 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cchcr1Q8K2I2 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cchcr1Q8K2I2 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cchcr1Q8K2I2 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cchcr1Q8K2I2 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cchcr1Q8K2I2 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms