Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps53Q8CCB4 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps53Q8CCB4 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps53Q8CCB4 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Vps53Q8CCB4 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps53Q8CCB4 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC14.68□□□□□ -0.06
Vps53Q8CCB4 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
Vps53Q8CCB4 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps53Q8CCB4 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps53Q8CCB4 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Vps53Q8CCB4 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps53Q8CCB4 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Vps53Q8CCB4 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps53Q8CCB4 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps53Q8CCB4 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps53Q8CCB4 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Vps53Q8CCB4 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps53Q8CCB4 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps53Q8CCB4 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps53Q8CCB4 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps53Q8CCB4 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Vps53Q8CCB4 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC14.67□□□□□ -0.06
Vps53Q8CCB4 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Vps53Q8CCB4 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC14.67□□□□□ -0.06
Vps53Q8CCB4 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps53Q8CCB4 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps53Q8CCB4 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Vps53Q8CCB4 Gm44094-201ENSMUST00000204703 2030 ntBASIC14.67□□□□□ -0.06
Vps53Q8CCB4 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vps53Q8CCB4 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps53Q8CCB4 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps53Q8CCB4 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vps53Q8CCB4 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vps53Q8CCB4 Gm6621-201ENSMUST00000193251 772 ntBASIC14.67□□□□□ -0.06
Vps53Q8CCB4 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps53Q8CCB4 AC132384.14-201ENSMUST00000219346 1147 ntBASIC14.67□□□□□ -0.06
Vps53Q8CCB4 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps53Q8CCB4 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps53Q8CCB4 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps53Q8CCB4 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps53Q8CCB4 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps53Q8CCB4 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps53Q8CCB4 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC14.67□□□□□ -0.06
Vps53Q8CCB4 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vps53Q8CCB4 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps53Q8CCB4 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps53Q8CCB4 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps53Q8CCB4 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vps53Q8CCB4 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps53Q8CCB4 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps53Q8CCB4 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps53Q8CCB4 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps53Q8CCB4 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vps53Q8CCB4 AC101945.2-201ENSMUST00000227886 1377 ntBASIC14.66□□□□□ -0.06
Vps53Q8CCB4 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.66□□□□□ -0.06
Vps53Q8CCB4 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps53Q8CCB4 Gm8805-201ENSMUST00000117848 313 ntBASIC14.66□□□□□ -0.06
Vps53Q8CCB4 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC14.66□□□□□ -0.06
Vps53Q8CCB4 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps53Q8CCB4 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC14.66□□□□□ -0.06
Vps53Q8CCB4 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Vps53Q8CCB4 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC14.66□□□□□ -0.06
Vps53Q8CCB4 Gm38158-201ENSMUST00000194617 339 ntBASIC14.66□□□□□ -0.06
Vps53Q8CCB4 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vps53Q8CCB4 Gm7046-201ENSMUST00000221351 977 ntBASIC14.66□□□□□ -0.06
Vps53Q8CCB4 AC132317.1-201ENSMUST00000227227 962 ntBASIC14.66□□□□□ -0.06
Vps53Q8CCB4 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vps53Q8CCB4 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps53Q8CCB4 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps53Q8CCB4 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vps53Q8CCB4 Gm38385-201ENSMUST00000194454 2351 ntBASIC14.66□□□□□ -0.06
Vps53Q8CCB4 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vps53Q8CCB4 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps53Q8CCB4 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps53Q8CCB4 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps53Q8CCB4 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Vps53Q8CCB4 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps53Q8CCB4 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps53Q8CCB4 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Vps53Q8CCB4 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
Vps53Q8CCB4 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Vps53Q8CCB4 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps53Q8CCB4 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps53Q8CCB4 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps53Q8CCB4 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC14.65□□□□□ -0.06
Vps53Q8CCB4 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps53Q8CCB4 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps53Q8CCB4 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps53Q8CCB4 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Vps53Q8CCB4 Gm4986-201ENSMUST00000119731 549 ntBASIC14.65□□□□□ -0.06
Vps53Q8CCB4 Gm11591-201ENSMUST00000120063 702 ntBASIC14.65□□□□□ -0.06
Vps53Q8CCB4 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
Vps53Q8CCB4 Gm12749-201ENSMUST00000122138 1159 ntBASIC14.65□□□□□ -0.06
Vps53Q8CCB4 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC14.65□□□□□ -0.06
Vps53Q8CCB4 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Vps53Q8CCB4 Gm25668-201ENSMUST00000157700 129 ntBASIC14.65□□□□□ -0.06
Vps53Q8CCB4 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC14.65□□□□□ -0.06
Vps53Q8CCB4 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
Vps53Q8CCB4 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC14.65□□□□□ -0.06
Vps53Q8CCB4 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms