Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC17.2■□□□□ 0.34
Usp40Q8BWR4 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp40Q8BWR4 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Usp40Q8BWR4 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC17.19■□□□□ 0.34
Usp40Q8BWR4 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC17.19■□□□□ 0.34
Usp40Q8BWR4 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp40Q8BWR4 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Usp40Q8BWR4 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC17.19■□□□□ 0.34
Usp40Q8BWR4 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Usp40Q8BWR4 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp40Q8BWR4 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp40Q8BWR4 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Usp40Q8BWR4 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC17.19■□□□□ 0.34
Usp40Q8BWR4 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp40Q8BWR4 Gm11331-201ENSMUST00000119764 288 ntBASIC17.19■□□□□ 0.34
Usp40Q8BWR4 Gm6039-201ENSMUST00000121667 1250 ntBASIC17.19■□□□□ 0.34
Usp40Q8BWR4 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp40Q8BWR4 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC17.19■□□□□ 0.34
Usp40Q8BWR4 Gm18041-201ENSMUST00000218210 618 ntBASIC17.19■□□□□ 0.34
Usp40Q8BWR4 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC17.19■□□□□ 0.34
Usp40Q8BWR4 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC17.19■□□□□ 0.34
Usp40Q8BWR4 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp40Q8BWR4 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC17.19■□□□□ 0.34
Usp40Q8BWR4 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp40Q8BWR4 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp40Q8BWR4 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp40Q8BWR4 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp40Q8BWR4 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp40Q8BWR4 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp40Q8BWR4 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp40Q8BWR4 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp40Q8BWR4 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Usp40Q8BWR4 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp40Q8BWR4 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC17.19■□□□□ 0.34
Usp40Q8BWR4 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp40Q8BWR4 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Usp40Q8BWR4 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC17.18■□□□□ 0.34
Usp40Q8BWR4 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp40Q8BWR4 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp40Q8BWR4 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp40Q8BWR4 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp40Q8BWR4 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Usp40Q8BWR4 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Usp40Q8BWR4 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp40Q8BWR4 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp40Q8BWR4 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC17.18■□□□□ 0.34
Usp40Q8BWR4 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC17.18■□□□□ 0.34
Usp40Q8BWR4 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC17.18■□□□□ 0.34
Usp40Q8BWR4 Gm42997-202ENSMUST00000200321 985 ntBASIC17.18■□□□□ 0.34
Usp40Q8BWR4 Gm7848-201ENSMUST00000210739 718 ntBASIC17.18■□□□□ 0.34
Usp40Q8BWR4 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp40Q8BWR4 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp40Q8BWR4 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp40Q8BWR4 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp40Q8BWR4 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp40Q8BWR4 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Usp40Q8BWR4 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp40Q8BWR4 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Usp40Q8BWR4 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp40Q8BWR4 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Usp40Q8BWR4 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Usp40Q8BWR4 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp40Q8BWR4 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp40Q8BWR4 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Usp40Q8BWR4 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Usp40Q8BWR4 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Usp40Q8BWR4 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Usp40Q8BWR4 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp40Q8BWR4 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Usp40Q8BWR4 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp40Q8BWR4 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Usp40Q8BWR4 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp40Q8BWR4 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp40Q8BWR4 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC17.17■□□□□ 0.34
Usp40Q8BWR4 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Usp40Q8BWR4 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp40Q8BWR4 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp40Q8BWR4 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Usp40Q8BWR4 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Usp40Q8BWR4 AC123619.2-202ENSMUST00000225097 1568 ntBASIC17.17■□□□□ 0.34
Usp40Q8BWR4 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp40Q8BWR4 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp40Q8BWR4 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp40Q8BWR4 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp40Q8BWR4 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Usp40Q8BWR4 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp40Q8BWR4 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp40Q8BWR4 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Usp40Q8BWR4 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp40Q8BWR4 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp40Q8BWR4 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp40Q8BWR4 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp40Q8BWR4 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp40Q8BWR4 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Usp40Q8BWR4 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Usp40Q8BWR4 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Usp40Q8BWR4 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp40Q8BWR4 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Usp40Q8BWR4 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Usp40Q8BWR4 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms