Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Gm19587-201ENSMUST00000191395 545 ntBASIC10.35□□□□□ -0.75
Smg1Q8BKX6 Gm43854-201ENSMUST00000200418 394 ntBASIC10.35□□□□□ -0.75
Smg1Q8BKX6 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Smg1Q8BKX6 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Smg1Q8BKX6 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smg1Q8BKX6 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC10.35□□□□□ -0.75
Smg1Q8BKX6 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smg1Q8BKX6 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smg1Q8BKX6 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smg1Q8BKX6 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smg1Q8BKX6 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smg1Q8BKX6 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Smg1Q8BKX6 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smg1Q8BKX6 AC107763.1-201ENSMUST00000226082 1365 ntBASIC10.35□□□□□ -0.75
Smg1Q8BKX6 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smg1Q8BKX6 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smg1Q8BKX6 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smg1Q8BKX6 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC10.35□□□□□ -0.75
Smg1Q8BKX6 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Smg1Q8BKX6 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC10.35□□□□□ -0.75
Smg1Q8BKX6 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC10.35□□□□□ -0.75
Smg1Q8BKX6 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Smg1Q8BKX6 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC10.35□□□□□ -0.75
Smg1Q8BKX6 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Smg1Q8BKX6 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC10.35□□□□□ -0.75
Smg1Q8BKX6 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smg1Q8BKX6 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smg1Q8BKX6 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smg1Q8BKX6 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smg1Q8BKX6 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smg1Q8BKX6 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smg1Q8BKX6 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smg1Q8BKX6 n-R5s84-201ENSMUST00000122591 109 ntBASIC10.35□□□□□ -0.75
Smg1Q8BKX6 Gm6644-201ENSMUST00000186507 951 ntBASIC10.35□□□□□ -0.75
Smg1Q8BKX6 Gm43912-201ENSMUST00000204352 538 ntBASIC10.35□□□□□ -0.75
Smg1Q8BKX6 Gm45592-201ENSMUST00000209605 1043 ntBASIC10.35□□□□□ -0.75
Smg1Q8BKX6 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC10.35□□□□□ -0.75
Smg1Q8BKX6 AC124433.1-201ENSMUST00000224483 1063 ntBASIC10.35□□□□□ -0.75
Smg1Q8BKX6 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smg1Q8BKX6 n-R5s185-201ENSMUST00000083953 119 ntBASIC10.35□□□□□ -0.75
Smg1Q8BKX6 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC10.35□□□□□ -0.75
Smg1Q8BKX6 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smg1Q8BKX6 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smg1Q8BKX6 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC10.34□□□□□ -0.75
Smg1Q8BKX6 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Smg1Q8BKX6 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smg1Q8BKX6 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smg1Q8BKX6 Gm13910-201ENSMUST00000121752 1428 ntBASIC10.34□□□□□ -0.75
Smg1Q8BKX6 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC10.34□□□□□ -0.75
Smg1Q8BKX6 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smg1Q8BKX6 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smg1Q8BKX6 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smg1Q8BKX6 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smg1Q8BKX6 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smg1Q8BKX6 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smg1Q8BKX6 Gm24791-201ENSMUST00000104284 131 ntBASIC10.34□□□□□ -0.75
Smg1Q8BKX6 Gm24398-201ENSMUST00000157870 109 ntBASIC10.34□□□□□ -0.75
Smg1Q8BKX6 Gm17070-201ENSMUST00000170463 784 ntBASIC10.34□□□□□ -0.75
Smg1Q8BKX6 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smg1Q8BKX6 Gm43267-201ENSMUST00000199664 1796 ntBASIC10.34□□□□□ -0.75
Smg1Q8BKX6 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
Smg1Q8BKX6 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC10.34□□□□□ -0.75
Smg1Q8BKX6 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smg1Q8BKX6 Gm18210-201ENSMUST00000209001 1524 ntBASIC10.34□□□□□ -0.75
Smg1Q8BKX6 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Smg1Q8BKX6 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smg1Q8BKX6 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smg1Q8BKX6 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smg1Q8BKX6 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smg1Q8BKX6 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC10.34□□□□□ -0.75
Smg1Q8BKX6 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smg1Q8BKX6 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC10.34□□□□□ -0.75
Smg1Q8BKX6 Gm4775-201ENSMUST00000169588 402 ntBASIC10.34□□□□□ -0.75
Smg1Q8BKX6 Gm43969-201ENSMUST00000204833 535 ntBASIC10.34□□□□□ -0.75
Smg1Q8BKX6 Gm3433-201ENSMUST00000210149 1058 ntBASIC10.34□□□□□ -0.75
Smg1Q8BKX6 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smg1Q8BKX6 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smg1Q8BKX6 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smg1Q8BKX6 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smg1Q8BKX6 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smg1Q8BKX6 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smg1Q8BKX6 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smg1Q8BKX6 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC10.34□□□□□ -0.75
Smg1Q8BKX6 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smg1Q8BKX6 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smg1Q8BKX6 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC10.34□□□□□ -0.75
Smg1Q8BKX6 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC10.34□□□□□ -0.75
Smg1Q8BKX6 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Smg1Q8BKX6 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC10.34□□□□□ -0.75
Smg1Q8BKX6 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smg1Q8BKX6 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smg1Q8BKX6 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smg1Q8BKX6 Gm43677-201ENSMUST00000198098 2378 ntBASIC10.33□□□□□ -0.76
Smg1Q8BKX6 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Smg1Q8BKX6 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smg1Q8BKX6 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Smg1Q8BKX6 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smg1Q8BKX6 Gm25766-201ENSMUST00000104101 131 ntBASIC10.33□□□□□ -0.76
Smg1Q8BKX6 Gm12663-201ENSMUST00000118481 958 ntBASIC10.33□□□□□ -0.76
Smg1Q8BKX6 Gm25226-201ENSMUST00000158198 123 ntBASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms