Protein–RNA interactions for Protein: Q8BGV9

Atg4d, Cysteine protease ATG4D, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4dQ8BGV9 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Atg4dQ8BGV9 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Atg4dQ8BGV9 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Atg4dQ8BGV9 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Atg4dQ8BGV9 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.72□□□□□ -0.53
Atg4dQ8BGV9 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Atg4dQ8BGV9 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Atg4dQ8BGV9 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Atg4dQ8BGV9 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Atg4dQ8BGV9 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Atg4dQ8BGV9 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Atg4dQ8BGV9 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Atg4dQ8BGV9 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Atg4dQ8BGV9 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Atg4dQ8BGV9 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Atg4dQ8BGV9 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.72□□□□□ -0.53
Atg4dQ8BGV9 Gm43438-201ENSMUST00000198133 379 ntBASIC11.72□□□□□ -0.53
Atg4dQ8BGV9 Gm45865-201ENSMUST00000211815 945 ntBASIC11.72□□□□□ -0.53
Atg4dQ8BGV9 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Atg4dQ8BGV9 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Atg4dQ8BGV9 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Atg4dQ8BGV9 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Atg4dQ8BGV9 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Atg4dQ8BGV9 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Atg4dQ8BGV9 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Atg4dQ8BGV9 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Atg4dQ8BGV9 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.72□□□□□ -0.53
Atg4dQ8BGV9 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Atg4dQ8BGV9 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Atg4dQ8BGV9 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Atg4dQ8BGV9 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Atg4dQ8BGV9 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Atg4dQ8BGV9 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.72□□□□□ -0.53
Atg4dQ8BGV9 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.72□□□□□ -0.53
Atg4dQ8BGV9 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Atg4dQ8BGV9 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.72□□□□□ -0.53
Atg4dQ8BGV9 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Atg4dQ8BGV9 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Atg4dQ8BGV9 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Atg4dQ8BGV9 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Atg4dQ8BGV9 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Atg4dQ8BGV9 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Atg4dQ8BGV9 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Atg4dQ8BGV9 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Atg4dQ8BGV9 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Atg4dQ8BGV9 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Atg4dQ8BGV9 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Atg4dQ8BGV9 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Atg4dQ8BGV9 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Atg4dQ8BGV9 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Atg4dQ8BGV9 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Atg4dQ8BGV9 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
Atg4dQ8BGV9 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Atg4dQ8BGV9 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.71□□□□□ -0.53
Atg4dQ8BGV9 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Atg4dQ8BGV9 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.71□□□□□ -0.53
Atg4dQ8BGV9 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Atg4dQ8BGV9 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.53
Atg4dQ8BGV9 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Atg4dQ8BGV9 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Atg4dQ8BGV9 Gm9083-201ENSMUST00000120423 819 ntBASIC11.71□□□□□ -0.53
Atg4dQ8BGV9 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Atg4dQ8BGV9 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.71□□□□□ -0.53
Atg4dQ8BGV9 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Atg4dQ8BGV9 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.71□□□□□ -0.53
Atg4dQ8BGV9 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.71□□□□□ -0.53
Atg4dQ8BGV9 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
Atg4dQ8BGV9 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Atg4dQ8BGV9 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Atg4dQ8BGV9 Gm26956-201ENSMUST00000182176 986 ntBASIC11.71□□□□□ -0.53
Atg4dQ8BGV9 Gm42937-201ENSMUST00000197360 752 ntBASIC11.71□□□□□ -0.53
Atg4dQ8BGV9 Gm43179-201ENSMUST00000198797 275 ntBASIC11.71□□□□□ -0.53
Atg4dQ8BGV9 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC11.71□□□□□ -0.53
Atg4dQ8BGV9 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Atg4dQ8BGV9 Gm30285-201ENSMUST00000214614 422 ntBASIC11.71□□□□□ -0.53
Atg4dQ8BGV9 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Atg4dQ8BGV9 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Atg4dQ8BGV9 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Atg4dQ8BGV9 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Atg4dQ8BGV9 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Atg4dQ8BGV9 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Atg4dQ8BGV9 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Atg4dQ8BGV9 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Atg4dQ8BGV9 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Atg4dQ8BGV9 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Atg4dQ8BGV9 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Atg4dQ8BGV9 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Atg4dQ8BGV9 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Atg4dQ8BGV9 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Atg4dQ8BGV9 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Atg4dQ8BGV9 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Atg4dQ8BGV9 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.71□□□□□ -0.54
Atg4dQ8BGV9 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Atg4dQ8BGV9 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Atg4dQ8BGV9 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Atg4dQ8BGV9 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Atg4dQ8BGV9 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC11.7□□□□□ -0.54
Atg4dQ8BGV9 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Atg4dQ8BGV9 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.7□□□□□ -0.54
Atg4dQ8BGV9 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms