Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim62Q80V85 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim62Q80V85 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim62Q80V85 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim62Q80V85 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim62Q80V85 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim62Q80V85 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim62Q80V85 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim62Q80V85 Gm11597-201ENSMUST00000121423 964 ntBASIC13.02□□□□□ -0.33
Trim62Q80V85 Gm14760-201ENSMUST00000121831 999 ntBASIC13.02□□□□□ -0.33
Trim62Q80V85 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC13.02□□□□□ -0.33
Trim62Q80V85 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim62Q80V85 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim62Q80V85 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Trim62Q80V85 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC13.02□□□□□ -0.33
Trim62Q80V85 Gm43179-201ENSMUST00000198797 275 ntBASIC13.02□□□□□ -0.33
Trim62Q80V85 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC13.02□□□□□ -0.33
Trim62Q80V85 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim62Q80V85 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim62Q80V85 Gm24136-201ENSMUST00000083374 165 ntBASIC13.02□□□□□ -0.33
Trim62Q80V85 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim62Q80V85 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.02□□□□□ -0.33
Trim62Q80V85 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim62Q80V85 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trim62Q80V85 Gm11661-201ENSMUST00000121761 1327 ntBASIC13.02□□□□□ -0.33
Trim62Q80V85 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim62Q80V85 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
Trim62Q80V85 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim62Q80V85 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim62Q80V85 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim62Q80V85 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim62Q80V85 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim62Q80V85 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim62Q80V85 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim62Q80V85 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim62Q80V85 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trim62Q80V85 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim62Q80V85 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim62Q80V85 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim62Q80V85 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trim62Q80V85 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim62Q80V85 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim62Q80V85 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim62Q80V85 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trim62Q80V85 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim62Q80V85 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trim62Q80V85 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trim62Q80V85 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim62Q80V85 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim62Q80V85 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trim62Q80V85 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim62Q80V85 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim62Q80V85 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trim62Q80V85 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim62Q80V85 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trim62Q80V85 Gm14999-201ENSMUST00000121039 624 ntBASIC13.01□□□□□ -0.33
Trim62Q80V85 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC13.01□□□□□ -0.33
Trim62Q80V85 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim62Q80V85 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim62Q80V85 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC13.01□□□□□ -0.33
Trim62Q80V85 Gm43438-201ENSMUST00000198133 379 ntBASIC13.01□□□□□ -0.33
Trim62Q80V85 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC13.01□□□□□ -0.33
Trim62Q80V85 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim62Q80V85 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trim62Q80V85 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim62Q80V85 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim62Q80V85 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim62Q80V85 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim62Q80V85 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim62Q80V85 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim62Q80V85 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim62Q80V85 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim62Q80V85 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.01□□□□□ -0.33
Trim62Q80V85 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim62Q80V85 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim62Q80V85 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim62Q80V85 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim62Q80V85 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim62Q80V85 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trim62Q80V85 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim62Q80V85 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim62Q80V85 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trim62Q80V85 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim62Q80V85 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trim62Q80V85 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim62Q80V85 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trim62Q80V85 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim62Q80V85 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Trim62Q80V85 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trim62Q80V85 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim62Q80V85 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trim62Q80V85 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim62Q80V85 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trim62Q80V85 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trim62Q80V85 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim62Q80V85 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim62Q80V85 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim62Q80V85 Gm2991-201ENSMUST00000173338 480 ntBASIC13□□□□□ -0.33
Trim62Q80V85 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Trim62Q80V85 Gm6621-201ENSMUST00000193251 772 ntBASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms