Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gm15276-201ENSMUST00000145953 498 ntBASIC12.38□□□□□ -0.43
Pcdh19Q80TF3 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.38□□□□□ -0.43
Pcdh19Q80TF3 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Pcdh19Q80TF3 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC12.38□□□□□ -0.43
Pcdh19Q80TF3 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.38□□□□□ -0.43
Pcdh19Q80TF3 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh19Q80TF3 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh19Q80TF3 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Pcdh19Q80TF3 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh19Q80TF3 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh19Q80TF3 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh19Q80TF3 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh19Q80TF3 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh19Q80TF3 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.38□□□□□ -0.43
Pcdh19Q80TF3 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh19Q80TF3 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh19Q80TF3 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Pcdh19Q80TF3 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh19Q80TF3 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh19Q80TF3 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh19Q80TF3 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh19Q80TF3 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Pcdh19Q80TF3 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Pcdh19Q80TF3 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh19Q80TF3 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh19Q80TF3 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh19Q80TF3 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh19Q80TF3 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Pcdh19Q80TF3 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh19Q80TF3 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Pcdh19Q80TF3 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh19Q80TF3 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Pcdh19Q80TF3 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh19Q80TF3 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh19Q80TF3 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh19Q80TF3 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh19Q80TF3 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.37□□□□□ -0.43
Pcdh19Q80TF3 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Pcdh19Q80TF3 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh19Q80TF3 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh19Q80TF3 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh19Q80TF3 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh19Q80TF3 Gm15236-201ENSMUST00000117309 379 ntBASIC12.37□□□□□ -0.43
Pcdh19Q80TF3 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.37□□□□□ -0.43
Pcdh19Q80TF3 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.37□□□□□ -0.43
Pcdh19Q80TF3 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh19Q80TF3 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh19Q80TF3 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh19Q80TF3 Gm18056-201ENSMUST00000207670 568 ntBASIC12.37□□□□□ -0.43
Pcdh19Q80TF3 Gm18061-201ENSMUST00000208350 562 ntBASIC12.37□□□□□ -0.43
Pcdh19Q80TF3 Gm18063-201ENSMUST00000208529 568 ntBASIC12.37□□□□□ -0.43
Pcdh19Q80TF3 Gm18052-201ENSMUST00000208750 559 ntBASIC12.37□□□□□ -0.43
Pcdh19Q80TF3 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh19Q80TF3 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Pcdh19Q80TF3 Mir433-201ENSMUST00000093564 124 ntBASIC12.37□□□□□ -0.43
Pcdh19Q80TF3 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh19Q80TF3 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh19Q80TF3 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh19Q80TF3 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh19Q80TF3 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh19Q80TF3 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Pcdh19Q80TF3 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh19Q80TF3 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh19Q80TF3 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.37□□□□□ -0.43
Pcdh19Q80TF3 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh19Q80TF3 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh19Q80TF3 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.37□□□□□ -0.43
Pcdh19Q80TF3 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh19Q80TF3 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh19Q80TF3 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh19Q80TF3 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh19Q80TF3 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh19Q80TF3 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Pcdh19Q80TF3 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh19Q80TF3 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh19Q80TF3 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Pcdh19Q80TF3 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh19Q80TF3 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh19Q80TF3 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
Pcdh19Q80TF3 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh19Q80TF3 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh19Q80TF3 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh19Q80TF3 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.36□□□□□ -0.43
Pcdh19Q80TF3 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh19Q80TF3 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh19Q80TF3 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh19Q80TF3 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.36□□□□□ -0.43
Pcdh19Q80TF3 Gm24830-201ENSMUST00000102024 166 ntBASIC12.36□□□□□ -0.43
Pcdh19Q80TF3 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.36□□□□□ -0.43
Pcdh19Q80TF3 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.36□□□□□ -0.43
Pcdh19Q80TF3 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.36□□□□□ -0.43
Pcdh19Q80TF3 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh19Q80TF3 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh19Q80TF3 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Pcdh19Q80TF3 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Pcdh19Q80TF3 Gm25890-201ENSMUST00000177643 165 ntBASIC12.36□□□□□ -0.43
Pcdh19Q80TF3 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.36□□□□□ -0.43
Pcdh19Q80TF3 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.36□□□□□ -0.43
Pcdh19Q80TF3 Gm22614-201ENSMUST00000178300 165 ntBASIC12.36□□□□□ -0.43
Pcdh19Q80TF3 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms