Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col11a2Q64739 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col11a2Q64739 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col11a2Q64739 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col11a2Q64739 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col11a2Q64739 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC14.88□□□□□ -0.03
Col11a2Q64739 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC14.88□□□□□ -0.03
Col11a2Q64739 Mir6923-201ENSMUST00000184592 72 ntBASIC14.88□□□□□ -0.03
Col11a2Q64739 CT030653.1-201ENSMUST00000224382 1279 ntBASIC14.88□□□□□ -0.03
Col11a2Q64739 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col11a2Q64739 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col11a2Q64739 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col11a2Q64739 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.88□□□□□ -0.03
Col11a2Q64739 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Col11a2Q64739 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC14.88□□□□□ -0.03
Col11a2Q64739 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col11a2Q64739 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Col11a2Q64739 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col11a2Q64739 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col11a2Q64739 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Col11a2Q64739 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col11a2Q64739 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col11a2Q64739 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col11a2Q64739 Gm15036-201ENSMUST00000118880 400 ntBASIC14.87□□□□□ -0.03
Col11a2Q64739 Gm14942-201ENSMUST00000119642 336 ntBASIC14.87□□□□□ -0.03
Col11a2Q64739 Gm24398-201ENSMUST00000157870 109 ntBASIC14.87□□□□□ -0.03
Col11a2Q64739 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
Col11a2Q64739 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col11a2Q64739 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC14.87□□□□□ -0.03
Col11a2Q64739 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC14.87□□□□□ -0.03
Col11a2Q64739 Gm37981-201ENSMUST00000194280 535 ntBASIC14.87□□□□□ -0.03
Col11a2Q64739 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Col11a2Q64739 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col11a2Q64739 AC102368.1-201ENSMUST00000227161 892 ntBASIC14.87□□□□□ -0.03
Col11a2Q64739 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col11a2Q64739 Gm16380-201ENSMUST00000077997 478 ntBASIC14.87□□□□□ -0.03
Col11a2Q64739 AC166836.1-201ENSMUST00000219933 1795 ntBASIC14.87□□□□□ -0.03
Col11a2Q64739 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col11a2Q64739 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col11a2Q64739 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col11a2Q64739 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col11a2Q64739 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Col11a2Q64739 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col11a2Q64739 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col11a2Q64739 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Col11a2Q64739 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col11a2Q64739 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Col11a2Q64739 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC14.87□□□□□ -0.03
Col11a2Q64739 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.86□□□□□ -0.03
Col11a2Q64739 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Col11a2Q64739 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col11a2Q64739 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col11a2Q64739 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Col11a2Q64739 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC14.86□□□□□ -0.03
Col11a2Q64739 Gm13549-201ENSMUST00000118339 796 ntBASIC14.86□□□□□ -0.03
Col11a2Q64739 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col11a2Q64739 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Col11a2Q64739 Gm8723-201ENSMUST00000166076 820 ntBASIC14.86□□□□□ -0.03
Col11a2Q64739 Gm8701-201ENSMUST00000169259 874 ntBASIC14.86□□□□□ -0.03
Col11a2Q64739 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col11a2Q64739 Gm43912-201ENSMUST00000204352 538 ntBASIC14.86□□□□□ -0.03
Col11a2Q64739 AC164618.2-201ENSMUST00000224770 573 ntBASIC14.86□□□□□ -0.03
Col11a2Q64739 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Col11a2Q64739 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col11a2Q64739 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC14.86□□□□□ -0.03
Col11a2Q64739 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col11a2Q64739 Gm18227-201ENSMUST00000211082 1468 ntBASIC14.86□□□□□ -0.03
Col11a2Q64739 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col11a2Q64739 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col11a2Q64739 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC14.86□□□□□ -0.03
Col11a2Q64739 AC151895.1-201ENSMUST00000219025 1742 ntBASIC14.86□□□□□ -0.03
Col11a2Q64739 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col11a2Q64739 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col11a2Q64739 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col11a2Q64739 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Col11a2Q64739 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col11a2Q64739 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col11a2Q64739 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Col11a2Q64739 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col11a2Q64739 Gm12218-201ENSMUST00000117666 399 ntBASIC14.86□□□□□ -0.03
Col11a2Q64739 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
Col11a2Q64739 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC14.86□□□□□ -0.03
Col11a2Q64739 Gm44506-201ENSMUST00000206278 965 ntBASIC14.86□□□□□ -0.03
Col11a2Q64739 Gm40879-201ENSMUST00000220759 612 ntBASIC14.86□□□□□ -0.03
Col11a2Q64739 Gm7959-201ENSMUST00000221823 1078 ntBASIC14.86□□□□□ -0.03
Col11a2Q64739 CT009536.2-201ENSMUST00000225370 665 ntBASIC14.86□□□□□ -0.03
Col11a2Q64739 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col11a2Q64739 Gm23680-201ENSMUST00000083162 164 ntBASIC14.86□□□□□ -0.03
Col11a2Q64739 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col11a2Q64739 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col11a2Q64739 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col11a2Q64739 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col11a2Q64739 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col11a2Q64739 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
Col11a2Q64739 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col11a2Q64739 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col11a2Q64739 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col11a2Q64739 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col11a2Q64739 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col11a2Q64739 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms