Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Gm3551-201ENSMUST00000190750 664 ntBASIC14.53□□□□□ -0.08
Scn9aQ62205 Gm28329-201ENSMUST00000191208 689 ntBASIC14.53□□□□□ -0.08
Scn9aQ62205 Gm29171-201ENSMUST00000191397 486 ntBASIC14.53□□□□□ -0.08
Scn9aQ62205 Gm7902-201ENSMUST00000198842 947 ntBASIC14.53□□□□□ -0.08
Scn9aQ62205 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Scn9aQ62205 AC156501.1-201ENSMUST00000228219 270 ntBASIC14.53□□□□□ -0.08
Scn9aQ62205 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Scn9aQ62205 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Scn9aQ62205 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Scn9aQ62205 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Scn9aQ62205 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC14.52□□□□□ -0.08
Scn9aQ62205 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Scn9aQ62205 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Scn9aQ62205 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Scn9aQ62205 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Scn9aQ62205 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Scn9aQ62205 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Scn9aQ62205 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Scn9aQ62205 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Scn9aQ62205 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Scn9aQ62205 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Scn9aQ62205 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Scn9aQ62205 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Scn9aQ62205 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Scn9aQ62205 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Scn9aQ62205 Gm25076-201ENSMUST00000104098 132 ntBASIC14.52□□□□□ -0.09
Scn9aQ62205 Gm11949-201ENSMUST00000117640 372 ntBASIC14.52□□□□□ -0.09
Scn9aQ62205 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC14.52□□□□□ -0.09
Scn9aQ62205 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Scn9aQ62205 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC14.52□□□□□ -0.09
Scn9aQ62205 Gm44421-201ENSMUST00000205064 1221 ntBASIC14.52□□□□□ -0.09
Scn9aQ62205 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Scn9aQ62205 AC115122.1-201ENSMUST00000224850 1040 ntBASIC14.52□□□□□ -0.09
Scn9aQ62205 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Scn9aQ62205 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Scn9aQ62205 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Scn9aQ62205 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC14.52□□□□□ -0.09
Scn9aQ62205 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Scn9aQ62205 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Scn9aQ62205 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Scn9aQ62205 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Scn9aQ62205 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Scn9aQ62205 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Scn9aQ62205 Gm8038-201ENSMUST00000164674 2044 ntBASIC14.52□□□□□ -0.09
Scn9aQ62205 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scn9aQ62205 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scn9aQ62205 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scn9aQ62205 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scn9aQ62205 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Scn9aQ62205 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Scn9aQ62205 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scn9aQ62205 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC14.51□□□□□ -0.09
Scn9aQ62205 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC14.51□□□□□ -0.09
Scn9aQ62205 Ighv2-1-201ENSMUST00000170946 353 ntBASIC14.51□□□□□ -0.09
Scn9aQ62205 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Scn9aQ62205 AC159376.1-201ENSMUST00000218504 630 ntBASIC14.51□□□□□ -0.09
Scn9aQ62205 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC14.51□□□□□ -0.09
Scn9aQ62205 AC126799.1-201ENSMUST00000221976 246 ntBASIC14.51□□□□□ -0.09
Scn9aQ62205 AC134860.1-201ENSMUST00000224867 660 ntBASIC14.51□□□□□ -0.09
Scn9aQ62205 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Scn9aQ62205 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scn9aQ62205 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scn9aQ62205 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC14.51□□□□□ -0.09
Scn9aQ62205 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scn9aQ62205 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Scn9aQ62205 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
Scn9aQ62205 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scn9aQ62205 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scn9aQ62205 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Scn9aQ62205 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Scn9aQ62205 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Scn9aQ62205 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scn9aQ62205 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scn9aQ62205 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scn9aQ62205 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Scn9aQ62205 n-R5s84-201ENSMUST00000122591 109 ntBASIC14.51□□□□□ -0.09
Scn9aQ62205 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Scn9aQ62205 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scn9aQ62205 Gm22442-201ENSMUST00000157256 144 ntBASIC14.51□□□□□ -0.09
Scn9aQ62205 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Scn9aQ62205 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC14.51□□□□□ -0.09
Scn9aQ62205 Ighv5-11-201ENSMUST00000193354 371 ntBASIC14.51□□□□□ -0.09
Scn9aQ62205 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC14.51□□□□□ -0.09
Scn9aQ62205 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC14.51□□□□□ -0.09
Scn9aQ62205 Gm6722-201ENSMUST00000221586 390 ntBASIC14.51□□□□□ -0.09
Scn9aQ62205 AC124433.1-201ENSMUST00000224483 1063 ntBASIC14.51□□□□□ -0.09
Scn9aQ62205 AC241621.2-201ENSMUST00000223991 2151 ntBASIC14.51□□□□□ -0.09
Scn9aQ62205 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Scn9aQ62205 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scn9aQ62205 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Scn9aQ62205 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scn9aQ62205 Gm13910-201ENSMUST00000121752 1428 ntBASIC14.5□□□□□ -0.09
Scn9aQ62205 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Scn9aQ62205 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scn9aQ62205 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Scn9aQ62205 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scn9aQ62205 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scn9aQ62205 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Scn9aQ62205 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scn9aQ62205 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms