Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Gm40879-201ENSMUST00000220759 612 ntBASIC13.79□□□□□ -0.2
Col11a1Q61245 Gm18968-201ENSMUST00000221319 862 ntBASIC13.79□□□□□ -0.2
Col11a1Q61245 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Col11a1Q61245 Gm25201-201ENSMUST00000083093 170 ntBASIC13.79□□□□□ -0.2
Col11a1Q61245 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col11a1Q61245 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col11a1Q61245 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col11a1Q61245 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col11a1Q61245 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col11a1Q61245 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col11a1Q61245 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Col11a1Q61245 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col11a1Q61245 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.79□□□□□ -0.2
Col11a1Q61245 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col11a1Q61245 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col11a1Q61245 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col11a1Q61245 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col11a1Q61245 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col11a1Q61245 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col11a1Q61245 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
Col11a1Q61245 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col11a1Q61245 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col11a1Q61245 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col11a1Q61245 CT009536.2-201ENSMUST00000225370 665 ntBASIC13.78□□□□□ -0.2
Col11a1Q61245 AC154572.1-201ENSMUST00000226098 1204 ntBASIC13.78□□□□□ -0.2
Col11a1Q61245 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col11a1Q61245 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Col11a1Q61245 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col11a1Q61245 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col11a1Q61245 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col11a1Q61245 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col11a1Q61245 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col11a1Q61245 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col11a1Q61245 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Col11a1Q61245 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Col11a1Q61245 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col11a1Q61245 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Col11a1Q61245 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col11a1Q61245 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Col11a1Q61245 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Col11a1Q61245 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col11a1Q61245 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col11a1Q61245 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Col11a1Q61245 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.78□□□□□ -0.2
Col11a1Q61245 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col11a1Q61245 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col11a1Q61245 Gm25063-201ENSMUST00000104666 94 ntBASIC13.78□□□□□ -0.2
Col11a1Q61245 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.78□□□□□ -0.2
Col11a1Q61245 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Col11a1Q61245 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC13.78□□□□□ -0.2
Col11a1Q61245 Gm37981-201ENSMUST00000194280 535 ntBASIC13.78□□□□□ -0.2
Col11a1Q61245 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Col11a1Q61245 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC13.78□□□□□ -0.2
Col11a1Q61245 AC164618.2-201ENSMUST00000224770 573 ntBASIC13.78□□□□□ -0.2
Col11a1Q61245 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col11a1Q61245 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col11a1Q61245 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col11a1Q61245 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col11a1Q61245 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col11a1Q61245 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col11a1Q61245 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Col11a1Q61245 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col11a1Q61245 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Col11a1Q61245 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Col11a1Q61245 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
Col11a1Q61245 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col11a1Q61245 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Col11a1Q61245 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col11a1Q61245 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col11a1Q61245 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col11a1Q61245 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col11a1Q61245 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col11a1Q61245 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.77□□□□□ -0.21
Col11a1Q61245 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Col11a1Q61245 Gm23272-201ENSMUST00000104053 129 ntBASIC13.77□□□□□ -0.21
Col11a1Q61245 Gm14942-201ENSMUST00000119642 336 ntBASIC13.77□□□□□ -0.21
Col11a1Q61245 Gm24398-201ENSMUST00000157870 109 ntBASIC13.77□□□□□ -0.21
Col11a1Q61245 Gm18201-201ENSMUST00000174735 875 ntBASIC13.77□□□□□ -0.21
Col11a1Q61245 Mir6923-201ENSMUST00000184592 72 ntBASIC13.77□□□□□ -0.21
Col11a1Q61245 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col11a1Q61245 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Col11a1Q61245 Gm8574-201ENSMUST00000203207 924 ntBASIC13.77□□□□□ -0.21
Col11a1Q61245 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC13.77□□□□□ -0.21
Col11a1Q61245 Gm7959-201ENSMUST00000221823 1078 ntBASIC13.77□□□□□ -0.21
Col11a1Q61245 Lgi3-203ENSMUST00000226548 1001 ntBASIC13.77□□□□□ -0.21
Col11a1Q61245 Gm4604-201ENSMUST00000025040 390 ntBASIC13.77□□□□□ -0.21
Col11a1Q61245 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.77□□□□□ -0.21
Col11a1Q61245 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col11a1Q61245 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Col11a1Q61245 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col11a1Q61245 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col11a1Q61245 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.77□□□□□ -0.21
Col11a1Q61245 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Col11a1Q61245 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col11a1Q61245 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col11a1Q61245 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col11a1Q61245 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.77□□□□□ -0.21
Col11a1Q61245 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col11a1Q61245 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Col11a1Q61245 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 105 ms