Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.88□□□□□ -0.51
Ripk1Q60855 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ripk1Q60855 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ripk1Q60855 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ripk1Q60855 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ripk1Q60855 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ripk1Q60855 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ripk1Q60855 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ripk1Q60855 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ripk1Q60855 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ripk1Q60855 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.88□□□□□ -0.51
Ripk1Q60855 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.88□□□□□ -0.51
Ripk1Q60855 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ripk1Q60855 Gm12390-201ENSMUST00000117897 397 ntBASIC11.88□□□□□ -0.51
Ripk1Q60855 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.88□□□□□ -0.51
Ripk1Q60855 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Ripk1Q60855 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ripk1Q60855 Gm8602-201ENSMUST00000184045 607 ntBASIC11.88□□□□□ -0.51
Ripk1Q60855 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.88□□□□□ -0.51
Ripk1Q60855 Gm37748-201ENSMUST00000194379 1140 ntBASIC11.88□□□□□ -0.51
Ripk1Q60855 Gm43818-201ENSMUST00000200605 466 ntBASIC11.88□□□□□ -0.51
Ripk1Q60855 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ripk1Q60855 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ripk1Q60855 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ripk1Q60855 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ripk1Q60855 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ripk1Q60855 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ripk1Q60855 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ripk1Q60855 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.88□□□□□ -0.51
Ripk1Q60855 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.88□□□□□ -0.51
Ripk1Q60855 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.88□□□□□ -0.51
Ripk1Q60855 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ripk1Q60855 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.88□□□□□ -0.51
Ripk1Q60855 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ripk1Q60855 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ripk1Q60855 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ripk1Q60855 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ripk1Q60855 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ripk1Q60855 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ripk1Q60855 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ripk1Q60855 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.88□□□□□ -0.51
Ripk1Q60855 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ripk1Q60855 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ripk1Q60855 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ripk1Q60855 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.88□□□□□ -0.51
Ripk1Q60855 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ripk1Q60855 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Ripk1Q60855 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ripk1Q60855 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Ripk1Q60855 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Ripk1Q60855 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.87□□□□□ -0.51
Ripk1Q60855 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.87□□□□□ -0.51
Ripk1Q60855 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ripk1Q60855 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ripk1Q60855 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ripk1Q60855 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ripk1Q60855 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ripk1Q60855 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Ripk1Q60855 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Ripk1Q60855 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.87□□□□□ -0.51
Ripk1Q60855 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Ripk1Q60855 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ripk1Q60855 Gm27682-201ENSMUST00000183930 110 ntBASIC11.87□□□□□ -0.51
Ripk1Q60855 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC11.87□□□□□ -0.51
Ripk1Q60855 Gm10268-201ENSMUST00000085340 555 ntBASIC11.87□□□□□ -0.51
Ripk1Q60855 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ripk1Q60855 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ripk1Q60855 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ripk1Q60855 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ripk1Q60855 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.87□□□□□ -0.51
Ripk1Q60855 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.87□□□□□ -0.51
Ripk1Q60855 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Ripk1Q60855 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ripk1Q60855 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Ripk1Q60855 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ripk1Q60855 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ripk1Q60855 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ripk1Q60855 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ripk1Q60855 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ripk1Q60855 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ripk1Q60855 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ripk1Q60855 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ripk1Q60855 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ripk1Q60855 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Ripk1Q60855 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ripk1Q60855 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ripk1Q60855 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ripk1Q60855 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ripk1Q60855 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Ripk1Q60855 Gm1335-201ENSMUST00000121653 386 ntBASIC11.86□□□□□ -0.51
Ripk1Q60855 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ripk1Q60855 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ripk1Q60855 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC11.86□□□□□ -0.51
Ripk1Q60855 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.86□□□□□ -0.51
Ripk1Q60855 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ripk1Q60855 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ripk1Q60855 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ripk1Q60855 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ripk1Q60855 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Ripk1Q60855 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms