Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav3-3Q5R1C3 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav3-3Q5R1C3 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC9.45□□□□□ -0.9
Trav3-3Q5R1C3 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Trav3-3Q5R1C3 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav3-3Q5R1C3 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Trav3-3Q5R1C3 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC9.45□□□□□ -0.9
Trav3-3Q5R1C3 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Trav3-3Q5R1C3 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trav3-3Q5R1C3 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav3-3Q5R1C3 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav3-3Q5R1C3 AC129336.2-201ENSMUST00000218053 3086 ntBASIC9.45□□□□□ -0.9
Trav3-3Q5R1C3 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Trav3-3Q5R1C3 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Trav3-3Q5R1C3 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Trav3-3Q5R1C3 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC9.44□□□□□ -0.9
Trav3-3Q5R1C3 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3-3Q5R1C3 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3-3Q5R1C3 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3-3Q5R1C3 Gm2238-201ENSMUST00000192074 3669 ntBASIC9.44□□□□□ -0.9
Trav3-3Q5R1C3 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3-3Q5R1C3 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3-3Q5R1C3 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC9.44□□□□□ -0.9
Trav3-3Q5R1C3 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC9.44□□□□□ -0.9
Trav3-3Q5R1C3 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC9.44□□□□□ -0.9
Trav3-3Q5R1C3 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3-3Q5R1C3 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3-3Q5R1C3 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3-3Q5R1C3 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Trav3-3Q5R1C3 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3-3Q5R1C3 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC9.44□□□□□ -0.9
Trav3-3Q5R1C3 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC9.44□□□□□ -0.9
Trav3-3Q5R1C3 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3-3Q5R1C3 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3-3Q5R1C3 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3-3Q5R1C3 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC9.44□□□□□ -0.9
Trav3-3Q5R1C3 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Trav3-3Q5R1C3 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Trav3-3Q5R1C3 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC9.44□□□□□ -0.9
Trav3-3Q5R1C3 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3-3Q5R1C3 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3-3Q5R1C3 Gm24158-201ENSMUST00000175263 71 ntBASIC9.44□□□□□ -0.9
Trav3-3Q5R1C3 Gm4804-201ENSMUST00000182234 999 ntBASIC9.44□□□□□ -0.9
Trav3-3Q5R1C3 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3-3Q5R1C3 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC9.44□□□□□ -0.9
Trav3-3Q5R1C3 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC9.44□□□□□ -0.9
Trav3-3Q5R1C3 AC121804.3-201ENSMUST00000223420 295 ntBASIC9.44□□□□□ -0.9
Trav3-3Q5R1C3 AC090659.2-201ENSMUST00000225378 1186 ntBASIC9.44□□□□□ -0.9
Trav3-3Q5R1C3 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3-3Q5R1C3 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3-3Q5R1C3 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3-3Q5R1C3 Gm6018-201ENSMUST00000216090 1306 ntBASIC9.44□□□□□ -0.9
Trav3-3Q5R1C3 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3-3Q5R1C3 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3-3Q5R1C3 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Trav3-3Q5R1C3 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3-3Q5R1C3 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3-3Q5R1C3 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3-3Q5R1C3 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
Trav3-3Q5R1C3 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3-3Q5R1C3 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3-3Q5R1C3 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3-3Q5R1C3 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3-3Q5R1C3 Gm5380-201ENSMUST00000119296 2136 ntBASIC9.44□□□□□ -0.9
Trav3-3Q5R1C3 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3-3Q5R1C3 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3-3Q5R1C3 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Trav3-3Q5R1C3 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3-3Q5R1C3 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3-3Q5R1C3 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3-3Q5R1C3 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Trav3-3Q5R1C3 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC9.44□□□□□ -0.9
Trav3-3Q5R1C3 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trav3-3Q5R1C3 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Gm43868-201ENSMUST00000205187 2114 ntBASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Gm8320-201ENSMUST00000177584 1762 ntBASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Gm8303-201ENSMUST00000178371 1762 ntBASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Gm8331-201ENSMUST00000178433 1762 ntBASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Gm13332-201ENSMUST00000120451 1398 ntBASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Gm22065-201ENSMUST00000103753 110 ntBASIC9.43□□□□□ -0.9
Trav3-3Q5R1C3 Gm22066-201ENSMUST00000103761 110 ntBASIC9.43□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms