Protein–RNA interactions for Protein: Q5PSV9

Mdc1, Mediator of DNA damage checkpoint protein 1, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mdc1Q5PSV9 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Mdc1Q5PSV9 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Mdc1Q5PSV9 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Mdc1Q5PSV9 AC091458.1-201ENSMUST00000220902 1361 ntBASIC16.23■□□□□ 0.19
Mdc1Q5PSV9 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Mdc1Q5PSV9 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Mdc1Q5PSV9 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC16.23■□□□□ 0.19
Mdc1Q5PSV9 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Mdc1Q5PSV9 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
Mdc1Q5PSV9 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC16.23■□□□□ 0.19
Mdc1Q5PSV9 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Mdc1Q5PSV9 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Mdc1Q5PSV9 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Mdc1Q5PSV9 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Mdc1Q5PSV9 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC16.22■□□□□ 0.19
Mdc1Q5PSV9 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Mdc1Q5PSV9 Gm38117-201ENSMUST00000194653 939 ntBASIC16.22■□□□□ 0.19
Mdc1Q5PSV9 Gm2965-201ENSMUST00000198365 343 ntBASIC16.22■□□□□ 0.19
Mdc1Q5PSV9 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Mdc1Q5PSV9 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Mdc1Q5PSV9 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC16.22■□□□□ 0.19
Mdc1Q5PSV9 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Mdc1Q5PSV9 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Mdc1Q5PSV9 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Mdc1Q5PSV9 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Mdc1Q5PSV9 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Mdc1Q5PSV9 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Mdc1Q5PSV9 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Mdc1Q5PSV9 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Mdc1Q5PSV9 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Mdc1Q5PSV9 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Mdc1Q5PSV9 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC16.22■□□□□ 0.19
Mdc1Q5PSV9 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Mdc1Q5PSV9 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Mdc1Q5PSV9 Gm22711-201ENSMUST00000116890 133 ntBASIC16.22■□□□□ 0.19
Mdc1Q5PSV9 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Mdc1Q5PSV9 Rn7s6-201ENSMUST00000175005 291 ntBASIC16.22■□□□□ 0.19
Mdc1Q5PSV9 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Mdc1Q5PSV9 Gm4034-201ENSMUST00000187674 480 ntBASIC16.22■□□□□ 0.19
Mdc1Q5PSV9 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC16.22■□□□□ 0.19
Mdc1Q5PSV9 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC16.22■□□□□ 0.19
Mdc1Q5PSV9 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Mdc1Q5PSV9 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Mdc1Q5PSV9 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Mdc1Q5PSV9 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Mdc1Q5PSV9 AC122840.1-201ENSMUST00000220915 3334 ntBASIC16.21■□□□□ 0.19
Mdc1Q5PSV9 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.21■□□□□ 0.19
Mdc1Q5PSV9 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Mdc1Q5PSV9 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Mdc1Q5PSV9 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Mdc1Q5PSV9 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Mdc1Q5PSV9 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Mdc1Q5PSV9 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Mdc1Q5PSV9 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Mdc1Q5PSV9 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Mdc1Q5PSV9 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Mdc1Q5PSV9 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Mdc1Q5PSV9 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Mdc1Q5PSV9 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Mdc1Q5PSV9 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Mdc1Q5PSV9 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC16.21■□□□□ 0.19
Mdc1Q5PSV9 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC16.21■□□□□ 0.19
Mdc1Q5PSV9 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC16.21■□□□□ 0.19
Mdc1Q5PSV9 Gm12407-201ENSMUST00000180219 324 ntBASIC16.21■□□□□ 0.19
Mdc1Q5PSV9 Gm9463-201ENSMUST00000206707 601 ntBASIC16.21■□□□□ 0.19
Mdc1Q5PSV9 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC16.21■□□□□ 0.19
Mdc1Q5PSV9 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Mdc1Q5PSV9 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Mdc1Q5PSV9 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Mdc1Q5PSV9 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC16.21■□□□□ 0.19
Mdc1Q5PSV9 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Mdc1Q5PSV9 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Mdc1Q5PSV9 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Mdc1Q5PSV9 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC16.2■□□□□ 0.18
Mdc1Q5PSV9 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Mdc1Q5PSV9 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Mdc1Q5PSV9 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Mdc1Q5PSV9 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Mdc1Q5PSV9 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Mdc1Q5PSV9 AC154671.1-201ENSMUST00000228617 1578 ntBASIC16.2■□□□□ 0.18
Mdc1Q5PSV9 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Mdc1Q5PSV9 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC16.2■□□□□ 0.18
Mdc1Q5PSV9 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Mdc1Q5PSV9 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Mdc1Q5PSV9 Gm12857-201ENSMUST00000117678 592 ntBASIC16.2■□□□□ 0.18
Mdc1Q5PSV9 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC16.2■□□□□ 0.18
Mdc1Q5PSV9 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
Mdc1Q5PSV9 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Mdc1Q5PSV9 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Mdc1Q5PSV9 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC16.2■□□□□ 0.18
Mdc1Q5PSV9 Gm9797-202ENSMUST00000218003 294 ntBASIC16.2■□□□□ 0.18
Mdc1Q5PSV9 Gm10288-201ENSMUST00000084614 537 ntBASIC16.2■□□□□ 0.18
Mdc1Q5PSV9 Gm10305-201ENSMUST00000195331 2475 ntBASIC16.2■□□□□ 0.18
Mdc1Q5PSV9 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC16.2■□□□□ 0.18
Mdc1Q5PSV9 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Mdc1Q5PSV9 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Mdc1Q5PSV9 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Mdc1Q5PSV9 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Mdc1Q5PSV9 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Mdc1Q5PSV9 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms