Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim80Q3V061 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim80Q3V061 Snora78-201ENSMUST00000158630 128 ntBASIC13.05□□□□□ -0.32
Trim80Q3V061 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trim80Q3V061 Gm8835-201ENSMUST00000173096 1169 ntBASIC13.05□□□□□ -0.32
Trim80Q3V061 Mir6420-201ENSMUST00000185032 102 ntBASIC13.05□□□□□ -0.32
Trim80Q3V061 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.05□□□□□ -0.32
Trim80Q3V061 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim80Q3V061 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim80Q3V061 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Trim80Q3V061 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim80Q3V061 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim80Q3V061 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim80Q3V061 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim80Q3V061 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim80Q3V061 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.05□□□□□ -0.32
Trim80Q3V061 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim80Q3V061 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim80Q3V061 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim80Q3V061 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim80Q3V061 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim80Q3V061 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim80Q3V061 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC13.05□□□□□ -0.32
Trim80Q3V061 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
Trim80Q3V061 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim80Q3V061 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trim80Q3V061 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim80Q3V061 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim80Q3V061 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim80Q3V061 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim80Q3V061 Gm27177-202ENSMUST00000183514 2703 ntBASIC13.04□□□□□ -0.32
Trim80Q3V061 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim80Q3V061 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim80Q3V061 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim80Q3V061 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim80Q3V061 AC131068.2-201ENSMUST00000226175 1453 ntBASIC13.04□□□□□ -0.32
Trim80Q3V061 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim80Q3V061 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim80Q3V061 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim80Q3V061 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trim80Q3V061 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trim80Q3V061 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim80Q3V061 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim80Q3V061 Gm12957-201ENSMUST00000117835 377 ntBASIC13.04□□□□□ -0.32
Trim80Q3V061 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim80Q3V061 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.04□□□□□ -0.32
Trim80Q3V061 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Trim80Q3V061 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim80Q3V061 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.04□□□□□ -0.32
Trim80Q3V061 Gm27839-201ENSMUST00000184242 106 ntBASIC13.04□□□□□ -0.32
Trim80Q3V061 Gm19931-201ENSMUST00000198920 368 ntBASIC13.04□□□□□ -0.32
Trim80Q3V061 Gm18905-201ENSMUST00000205454 928 ntBASIC13.04□□□□□ -0.32
Trim80Q3V061 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.04□□□□□ -0.32
Trim80Q3V061 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim80Q3V061 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim80Q3V061 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC13.04□□□□□ -0.32
Trim80Q3V061 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.04□□□□□ -0.32
Trim80Q3V061 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim80Q3V061 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim80Q3V061 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trim80Q3V061 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trim80Q3V061 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim80Q3V061 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim80Q3V061 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim80Q3V061 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim80Q3V061 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim80Q3V061 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.04□□□□□ -0.32
Trim80Q3V061 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim80Q3V061 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim80Q3V061 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim80Q3V061 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.04□□□□□ -0.32
Trim80Q3V061 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim80Q3V061 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Trim80Q3V061 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim80Q3V061 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.03□□□□□ -0.32
Trim80Q3V061 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim80Q3V061 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim80Q3V061 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC13.03□□□□□ -0.32
Trim80Q3V061 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim80Q3V061 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim80Q3V061 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim80Q3V061 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim80Q3V061 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim80Q3V061 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim80Q3V061 Gm11814-201ENSMUST00000119515 929 ntBASIC13.03□□□□□ -0.32
Trim80Q3V061 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.03□□□□□ -0.32
Trim80Q3V061 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.03□□□□□ -0.32
Trim80Q3V061 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.03□□□□□ -0.32
Trim80Q3V061 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim80Q3V061 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim80Q3V061 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim80Q3V061 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim80Q3V061 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim80Q3V061 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim80Q3V061 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Trim80Q3V061 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim80Q3V061 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim80Q3V061 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim80Q3V061 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim80Q3V061 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms