Protein–RNA interactions for Protein: Q3UW12

Cnga4, Cyclic nucleotide-gated cation channel alpha-4, mousemouse

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnga4Q3UW12 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cnga4Q3UW12 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cnga4Q3UW12 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cnga4Q3UW12 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cnga4Q3UW12 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cnga4Q3UW12 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cnga4Q3UW12 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cnga4Q3UW12 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cnga4Q3UW12 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cnga4Q3UW12 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cnga4Q3UW12 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cnga4Q3UW12 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cnga4Q3UW12 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cnga4Q3UW12 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Cnga4Q3UW12 Gm13689-201ENSMUST00000119360 685 ntBASIC12.75□□□□□ -0.37
Cnga4Q3UW12 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.75□□□□□ -0.37
Cnga4Q3UW12 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
Cnga4Q3UW12 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.75□□□□□ -0.37
Cnga4Q3UW12 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.75□□□□□ -0.37
Cnga4Q3UW12 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cnga4Q3UW12 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.75□□□□□ -0.37
Cnga4Q3UW12 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.75□□□□□ -0.37
Cnga4Q3UW12 Gm42599-201ENSMUST00000201308 469 ntBASIC12.75□□□□□ -0.37
Cnga4Q3UW12 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cnga4Q3UW12 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.75□□□□□ -0.37
Cnga4Q3UW12 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cnga4Q3UW12 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cnga4Q3UW12 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cnga4Q3UW12 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cnga4Q3UW12 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cnga4Q3UW12 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cnga4Q3UW12 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cnga4Q3UW12 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cnga4Q3UW12 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cnga4Q3UW12 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cnga4Q3UW12 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Cnga4Q3UW12 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cnga4Q3UW12 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Cnga4Q3UW12 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.74□□□□□ -0.37
Cnga4Q3UW12 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.74□□□□□ -0.37
Cnga4Q3UW12 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cnga4Q3UW12 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cnga4Q3UW12 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cnga4Q3UW12 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cnga4Q3UW12 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cnga4Q3UW12 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cnga4Q3UW12 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cnga4Q3UW12 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.74□□□□□ -0.37
Cnga4Q3UW12 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Cnga4Q3UW12 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cnga4Q3UW12 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Cnga4Q3UW12 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cnga4Q3UW12 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cnga4Q3UW12 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cnga4Q3UW12 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.74□□□□□ -0.37
Cnga4Q3UW12 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cnga4Q3UW12 Gm14701-201ENSMUST00000117156 348 ntBASIC12.74□□□□□ -0.37
Cnga4Q3UW12 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cnga4Q3UW12 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cnga4Q3UW12 Gm27702-201ENSMUST00000184512 56 ntBASIC12.74□□□□□ -0.37
Cnga4Q3UW12 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.74□□□□□ -0.37
Cnga4Q3UW12 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.74□□□□□ -0.37
Cnga4Q3UW12 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cnga4Q3UW12 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cnga4Q3UW12 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cnga4Q3UW12 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cnga4Q3UW12 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cnga4Q3UW12 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Cnga4Q3UW12 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cnga4Q3UW12 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cnga4Q3UW12 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cnga4Q3UW12 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cnga4Q3UW12 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cnga4Q3UW12 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cnga4Q3UW12 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Cnga4Q3UW12 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cnga4Q3UW12 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
Cnga4Q3UW12 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cnga4Q3UW12 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cnga4Q3UW12 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.73□□□□□ -0.37
Cnga4Q3UW12 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Cnga4Q3UW12 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cnga4Q3UW12 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cnga4Q3UW12 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cnga4Q3UW12 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cnga4Q3UW12 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Cnga4Q3UW12 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cnga4Q3UW12 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cnga4Q3UW12 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.73□□□□□ -0.37
Cnga4Q3UW12 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cnga4Q3UW12 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cnga4Q3UW12 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cnga4Q3UW12 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cnga4Q3UW12 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cnga4Q3UW12 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.73□□□□□ -0.37
Cnga4Q3UW12 Gm14760-201ENSMUST00000121831 999 ntBASIC12.73□□□□□ -0.37
Cnga4Q3UW12 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.73□□□□□ -0.37
Cnga4Q3UW12 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cnga4Q3UW12 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cnga4Q3UW12 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms