Protein–RNA interactions for Protein: Q3UHJ8

Rnf44, RING finger protein 44, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf44Q3UHJ8 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Rnf44Q3UHJ8 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf44Q3UHJ8 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.14□□□□□ -0.47
Rnf44Q3UHJ8 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf44Q3UHJ8 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf44Q3UHJ8 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf44Q3UHJ8 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf44Q3UHJ8 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf44Q3UHJ8 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf44Q3UHJ8 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf44Q3UHJ8 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.14□□□□□ -0.47
Rnf44Q3UHJ8 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf44Q3UHJ8 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Rnf44Q3UHJ8 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf44Q3UHJ8 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Rnf44Q3UHJ8 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Rnf44Q3UHJ8 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf44Q3UHJ8 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Rnf44Q3UHJ8 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.14□□□□□ -0.47
Rnf44Q3UHJ8 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf44Q3UHJ8 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Rnf44Q3UHJ8 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.14□□□□□ -0.47
Rnf44Q3UHJ8 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf44Q3UHJ8 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.14□□□□□ -0.47
Rnf44Q3UHJ8 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.14□□□□□ -0.47
Rnf44Q3UHJ8 Gm26035-201ENSMUST00000083065 308 ntBASIC12.14□□□□□ -0.47
Rnf44Q3UHJ8 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf44Q3UHJ8 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Rnf44Q3UHJ8 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Rnf44Q3UHJ8 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf44Q3UHJ8 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.14□□□□□ -0.47
Rnf44Q3UHJ8 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf44Q3UHJ8 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf44Q3UHJ8 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf44Q3UHJ8 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf44Q3UHJ8 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf44Q3UHJ8 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf44Q3UHJ8 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf44Q3UHJ8 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf44Q3UHJ8 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf44Q3UHJ8 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf44Q3UHJ8 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf44Q3UHJ8 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf44Q3UHJ8 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf44Q3UHJ8 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.13□□□□□ -0.47
Rnf44Q3UHJ8 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf44Q3UHJ8 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf44Q3UHJ8 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Rnf44Q3UHJ8 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf44Q3UHJ8 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf44Q3UHJ8 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf44Q3UHJ8 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Rnf44Q3UHJ8 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf44Q3UHJ8 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf44Q3UHJ8 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf44Q3UHJ8 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf44Q3UHJ8 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf44Q3UHJ8 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf44Q3UHJ8 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.13□□□□□ -0.47
Rnf44Q3UHJ8 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf44Q3UHJ8 Gm44405-201ENSMUST00000198952 126 ntBASIC12.13□□□□□ -0.47
Rnf44Q3UHJ8 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.13□□□□□ -0.47
Rnf44Q3UHJ8 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf44Q3UHJ8 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Rnf44Q3UHJ8 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf44Q3UHJ8 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.13□□□□□ -0.47
Rnf44Q3UHJ8 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf44Q3UHJ8 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf44Q3UHJ8 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf44Q3UHJ8 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.13□□□□□ -0.47
Rnf44Q3UHJ8 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf44Q3UHJ8 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Rnf44Q3UHJ8 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Rnf44Q3UHJ8 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf44Q3UHJ8 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf44Q3UHJ8 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf44Q3UHJ8 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf44Q3UHJ8 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf44Q3UHJ8 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf44Q3UHJ8 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf44Q3UHJ8 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf44Q3UHJ8 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf44Q3UHJ8 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Rnf44Q3UHJ8 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Rnf44Q3UHJ8 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.12□□□□□ -0.47
Rnf44Q3UHJ8 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf44Q3UHJ8 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf44Q3UHJ8 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf44Q3UHJ8 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf44Q3UHJ8 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf44Q3UHJ8 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Rnf44Q3UHJ8 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf44Q3UHJ8 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf44Q3UHJ8 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Rnf44Q3UHJ8 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf44Q3UHJ8 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf44Q3UHJ8 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf44Q3UHJ8 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf44Q3UHJ8 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf44Q3UHJ8 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms