Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 AC162938.1-201ENSMUST00000213140 2323 ntBASIC11.52□□□□□ -0.57
Spg11Q3UHA3 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Spg11Q3UHA3 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Spg11Q3UHA3 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Spg11Q3UHA3 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Spg11Q3UHA3 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC11.52□□□□□ -0.57
Spg11Q3UHA3 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC11.52□□□□□ -0.57
Spg11Q3UHA3 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Spg11Q3UHA3 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC11.52□□□□□ -0.57
Spg11Q3UHA3 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Spg11Q3UHA3 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Spg11Q3UHA3 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.51□□□□□ -0.57
Spg11Q3UHA3 Gm13351-201ENSMUST00000118087 414 ntBASIC11.51□□□□□ -0.57
Spg11Q3UHA3 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC11.51□□□□□ -0.57
Spg11Q3UHA3 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Spg11Q3UHA3 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC11.51□□□□□ -0.57
Spg11Q3UHA3 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Spg11Q3UHA3 Gm29499-201ENSMUST00000189151 486 ntBASIC11.51□□□□□ -0.57
Spg11Q3UHA3 Gm28329-201ENSMUST00000191208 689 ntBASIC11.51□□□□□ -0.57
Spg11Q3UHA3 Gm29171-201ENSMUST00000191397 486 ntBASIC11.51□□□□□ -0.57
Spg11Q3UHA3 Gm45085-201ENSMUST00000209100 441 ntBASIC11.51□□□□□ -0.57
Spg11Q3UHA3 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Spg11Q3UHA3 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC11.51□□□□□ -0.57
Spg11Q3UHA3 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.51□□□□□ -0.57
Spg11Q3UHA3 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Spg11Q3UHA3 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Spg11Q3UHA3 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Spg11Q3UHA3 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Spg11Q3UHA3 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Spg11Q3UHA3 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Spg11Q3UHA3 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Spg11Q3UHA3 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
Spg11Q3UHA3 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Spg11Q3UHA3 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Spg11Q3UHA3 Gm38577-201ENSMUST00000221531 4545 ntBASIC11.51□□□□□ -0.57
Spg11Q3UHA3 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Spg11Q3UHA3 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.51□□□□□ -0.57
Spg11Q3UHA3 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Spg11Q3UHA3 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Spg11Q3UHA3 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Spg11Q3UHA3 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Spg11Q3UHA3 Gm11663-201ENSMUST00000117888 290 ntBASIC11.51□□□□□ -0.57
Spg11Q3UHA3 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC11.51□□□□□ -0.57
Spg11Q3UHA3 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC11.51□□□□□ -0.57
Spg11Q3UHA3 Gm20694-201ENSMUST00000176943 404 ntBASIC11.51□□□□□ -0.57
Spg11Q3UHA3 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC11.51□□□□□ -0.57
Spg11Q3UHA3 Gm6450-201ENSMUST00000200896 574 ntBASIC11.51□□□□□ -0.57
Spg11Q3UHA3 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.51□□□□□ -0.57
Spg11Q3UHA3 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Spg11Q3UHA3 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Spg11Q3UHA3 AC154759.1-201ENSMUST00000224137 1159 ntBASIC11.51□□□□□ -0.57
Spg11Q3UHA3 AC187103.3-201ENSMUST00000225725 646 ntBASIC11.51□□□□□ -0.57
Spg11Q3UHA3 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Spg11Q3UHA3 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Spg11Q3UHA3 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Spg11Q3UHA3 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
Spg11Q3UHA3 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
Spg11Q3UHA3 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.51□□□□□ -0.57
Spg11Q3UHA3 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Spg11Q3UHA3 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Spg11Q3UHA3 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Spg11Q3UHA3 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Spg11Q3UHA3 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Spg11Q3UHA3 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Spg11Q3UHA3 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Spg11Q3UHA3 Gm7211-201ENSMUST00000172692 1118 ntBASIC11.5□□□□□ -0.57
Spg11Q3UHA3 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC11.5□□□□□ -0.57
Spg11Q3UHA3 Gm18776-201ENSMUST00000188833 654 ntBASIC11.5□□□□□ -0.57
Spg11Q3UHA3 Ighv1-2-201ENSMUST00000195325 378 ntBASIC11.5□□□□□ -0.57
Spg11Q3UHA3 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Spg11Q3UHA3 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Spg11Q3UHA3 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Spg11Q3UHA3 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.5□□□□□ -0.57
Spg11Q3UHA3 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Spg11Q3UHA3 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Spg11Q3UHA3 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Spg11Q3UHA3 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Spg11Q3UHA3 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Spg11Q3UHA3 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Spg11Q3UHA3 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Spg11Q3UHA3 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Spg11Q3UHA3 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Spg11Q3UHA3 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Spg11Q3UHA3 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Spg11Q3UHA3 Gm14993-201ENSMUST00000121180 164 ntBASIC11.5□□□□□ -0.57
Spg11Q3UHA3 Bola3-203ENSMUST00000122216 554 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Spg11Q3UHA3 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC11.5□□□□□ -0.57
Spg11Q3UHA3 Gm16167-201ENSMUST00000160428 1065 ntBASIC11.5□□□□□ -0.57
Spg11Q3UHA3 Rhoc-205ENSMUST00000196817 877 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
Spg11Q3UHA3 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC11.5□□□□□ -0.57
Spg11Q3UHA3 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Spg11Q3UHA3 Rhno1-207ENSMUST00000223237 1081 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Spg11Q3UHA3 AC142266.1-201ENSMUST00000228107 415 ntBASIC11.5□□□□□ -0.57
Spg11Q3UHA3 Mir339-201ENSMUST00000083659 96 ntBASIC11.5□□□□□ -0.57
Spg11Q3UHA3 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Spg11Q3UHA3 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Spg11Q3UHA3 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Spg11Q3UHA3 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Spg11Q3UHA3 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Spg11Q3UHA3 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms