Protein–RNA interactions for Protein: Q3UH53

Sdk1, Protein sidekick-1, mousemouse

Predictions only

Length 2,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdk1Q3UH53 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sdk1Q3UH53 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sdk1Q3UH53 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sdk1Q3UH53 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sdk1Q3UH53 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sdk1Q3UH53 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sdk1Q3UH53 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Sdk1Q3UH53 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sdk1Q3UH53 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sdk1Q3UH53 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Sdk1Q3UH53 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sdk1Q3UH53 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sdk1Q3UH53 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC10.68□□□□□ -0.7
Sdk1Q3UH53 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sdk1Q3UH53 Gm25072-201ENSMUST00000175233 235 ntBASIC10.68□□□□□ -0.7
Sdk1Q3UH53 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sdk1Q3UH53 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC10.68□□□□□ -0.7
Sdk1Q3UH53 Gm19187-201ENSMUST00000206781 892 ntBASIC10.68□□□□□ -0.7
Sdk1Q3UH53 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sdk1Q3UH53 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sdk1Q3UH53 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC10.68□□□□□ -0.7
Sdk1Q3UH53 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sdk1Q3UH53 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Sdk1Q3UH53 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sdk1Q3UH53 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sdk1Q3UH53 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Sdk1Q3UH53 Gm21998-201ENSMUST00000117552 1308 ntBASIC10.68□□□□□ -0.7
Sdk1Q3UH53 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sdk1Q3UH53 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sdk1Q3UH53 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sdk1Q3UH53 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sdk1Q3UH53 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sdk1Q3UH53 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sdk1Q3UH53 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sdk1Q3UH53 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC10.68□□□□□ -0.7
Sdk1Q3UH53 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sdk1Q3UH53 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC10.68□□□□□ -0.7
Sdk1Q3UH53 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sdk1Q3UH53 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sdk1Q3UH53 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Sdk1Q3UH53 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
Sdk1Q3UH53 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sdk1Q3UH53 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sdk1Q3UH53 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Sdk1Q3UH53 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC10.67□□□□□ -0.7
Sdk1Q3UH53 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Sdk1Q3UH53 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sdk1Q3UH53 Gm9230-201ENSMUST00000188228 532 ntBASIC10.67□□□□□ -0.7
Sdk1Q3UH53 Gm45120-201ENSMUST00000208880 408 ntBASIC10.67□□□□□ -0.7
Sdk1Q3UH53 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sdk1Q3UH53 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Sdk1Q3UH53 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC10.67□□□□□ -0.7
Sdk1Q3UH53 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC10.67□□□□□ -0.7
Sdk1Q3UH53 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sdk1Q3UH53 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Sdk1Q3UH53 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Sdk1Q3UH53 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC10.67□□□□□ -0.7
Sdk1Q3UH53 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sdk1Q3UH53 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sdk1Q3UH53 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC10.67□□□□□ -0.7
Sdk1Q3UH53 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Sdk1Q3UH53 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Sdk1Q3UH53 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sdk1Q3UH53 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sdk1Q3UH53 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sdk1Q3UH53 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sdk1Q3UH53 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sdk1Q3UH53 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC10.67□□□□□ -0.7
Sdk1Q3UH53 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sdk1Q3UH53 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sdk1Q3UH53 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Sdk1Q3UH53 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sdk1Q3UH53 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sdk1Q3UH53 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sdk1Q3UH53 Gm12628-201ENSMUST00000122193 382 ntBASIC10.67□□□□□ -0.7
Sdk1Q3UH53 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC10.67□□□□□ -0.7
Sdk1Q3UH53 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sdk1Q3UH53 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sdk1Q3UH53 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sdk1Q3UH53 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sdk1Q3UH53 Gm17831-201ENSMUST00000205579 900 ntBASIC10.67□□□□□ -0.7
Sdk1Q3UH53 AC125209.1-201ENSMUST00000225812 766 ntBASIC10.67□□□□□ -0.7
Sdk1Q3UH53 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sdk1Q3UH53 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sdk1Q3UH53 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sdk1Q3UH53 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sdk1Q3UH53 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sdk1Q3UH53 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sdk1Q3UH53 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
Sdk1Q3UH53 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Sdk1Q3UH53 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sdk1Q3UH53 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sdk1Q3UH53 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sdk1Q3UH53 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sdk1Q3UH53 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sdk1Q3UH53 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Sdk1Q3UH53 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sdk1Q3UH53 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sdk1Q3UH53 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Sdk1Q3UH53 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms