Protein–RNA interactions for Protein: Q04886

Sox8, Transcription factor SOX-8, mousemouse

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox8Q04886 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sox8Q04886 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sox8Q04886 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox8Q04886 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox8Q04886 Gm24231-201ENSMUST00000104315 133 ntBASIC13.27□□□□□ -0.29
Sox8Q04886 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Sox8Q04886 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Sox8Q04886 Gm12314-201ENSMUST00000118104 538 ntBASIC13.27□□□□□ -0.29
Sox8Q04886 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sox8Q04886 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC13.27□□□□□ -0.29
Sox8Q04886 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC13.27□□□□□ -0.29
Sox8Q04886 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC13.27□□□□□ -0.29
Sox8Q04886 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC13.27□□□□□ -0.29
Sox8Q04886 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Sox8Q04886 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC13.27□□□□□ -0.29
Sox8Q04886 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Sox8Q04886 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox8Q04886 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox8Q04886 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Sox8Q04886 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Sox8Q04886 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Sox8Q04886 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox8Q04886 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox8Q04886 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Sox8Q04886 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox8Q04886 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sox8Q04886 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox8Q04886 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox8Q04886 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox8Q04886 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox8Q04886 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sox8Q04886 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Sox8Q04886 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox8Q04886 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox8Q04886 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sox8Q04886 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox8Q04886 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox8Q04886 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox8Q04886 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox8Q04886 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
Sox8Q04886 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Sox8Q04886 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Sox8Q04886 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox8Q04886 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox8Q04886 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox8Q04886 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox8Q04886 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox8Q04886 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox8Q04886 Gm24830-201ENSMUST00000102024 166 ntBASIC13.26□□□□□ -0.29
Sox8Q04886 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox8Q04886 Gm14832-201ENSMUST00000121289 322 ntBASIC13.26□□□□□ -0.29
Sox8Q04886 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Sox8Q04886 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Sox8Q04886 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox8Q04886 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sox8Q04886 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sox8Q04886 Gm25890-201ENSMUST00000177643 165 ntBASIC13.26□□□□□ -0.29
Sox8Q04886 Rnu1b2-201ENSMUST00000178073 165 ntBASIC13.26□□□□□ -0.29
Sox8Q04886 Rnu1b1-201ENSMUST00000178250 165 ntBASIC13.26□□□□□ -0.29
Sox8Q04886 Gm22614-201ENSMUST00000178300 165 ntBASIC13.26□□□□□ -0.29
Sox8Q04886 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC13.26□□□□□ -0.29
Sox8Q04886 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sox8Q04886 Gm3096-201ENSMUST00000185770 364 ntBASIC13.26□□□□□ -0.29
Sox8Q04886 Gm42937-201ENSMUST00000197360 752 ntBASIC13.26□□□□□ -0.29
Sox8Q04886 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox8Q04886 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC13.26□□□□□ -0.29
Sox8Q04886 Gm44967-201ENSMUST00000207047 631 ntBASIC13.26□□□□□ -0.29
Sox8Q04886 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox8Q04886 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox8Q04886 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sox8Q04886 Gm22042-201ENSMUST00000082989 165 ntBASIC13.26□□□□□ -0.29
Sox8Q04886 Gm26232-201ENSMUST00000083360 166 ntBASIC13.26□□□□□ -0.29
Sox8Q04886 Gm24136-201ENSMUST00000083374 165 ntBASIC13.26□□□□□ -0.29
Sox8Q04886 Rnu1b6-201ENSMUST00000083839 166 ntBASIC13.26□□□□□ -0.29
Sox8Q04886 Gm26110-201ENSMUST00000083971 165 ntBASIC13.26□□□□□ -0.29
Sox8Q04886 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sox8Q04886 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox8Q04886 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox8Q04886 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Sox8Q04886 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sox8Q04886 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox8Q04886 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox8Q04886 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sox8Q04886 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox8Q04886 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sox8Q04886 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox8Q04886 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC13.25□□□□□ -0.29
Sox8Q04886 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Sox8Q04886 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox8Q04886 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox8Q04886 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox8Q04886 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox8Q04886 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox8Q04886 Gm10782-202ENSMUST00000223775 1480 ntBASIC13.25□□□□□ -0.29
Sox8Q04886 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox8Q04886 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sox8Q04886 Gm14109-201ENSMUST00000118814 309 ntBASIC13.25□□□□□ -0.29
Sox8Q04886 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC13.25□□□□□ -0.29
Sox8Q04886 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sox8Q04886 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms