Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Trim43cP86449 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim43cP86449 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim43cP86449 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim43cP86449 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim43cP86449 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC13.69□□□□□ -0.22
Trim43cP86449 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim43cP86449 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim43cP86449 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC13.69□□□□□ -0.22
Trim43cP86449 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim43cP86449 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim43cP86449 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.68□□□□□ -0.22
Trim43cP86449 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trim43cP86449 Gm4735-201ENSMUST00000138679 1302 ntBASIC13.68□□□□□ -0.22
Trim43cP86449 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim43cP86449 Gm5855-201ENSMUST00000200240 1305 ntBASIC13.68□□□□□ -0.22
Trim43cP86449 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim43cP86449 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim43cP86449 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim43cP86449 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim43cP86449 Gm13786-201ENSMUST00000122371 333 ntBASIC13.68□□□□□ -0.22
Trim43cP86449 Gm8062-201ENSMUST00000139696 444 ntBASIC13.68□□□□□ -0.22
Trim43cP86449 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim43cP86449 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim43cP86449 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim43cP86449 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trim43cP86449 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC13.68□□□□□ -0.22
Trim43cP86449 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC13.68□□□□□ -0.22
Trim43cP86449 Gm39404-201ENSMUST00000216350 313 ntBASIC13.68□□□□□ -0.22
Trim43cP86449 CU024892.2-201ENSMUST00000224608 832 ntBASIC13.68□□□□□ -0.22
Trim43cP86449 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim43cP86449 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim43cP86449 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim43cP86449 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim43cP86449 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim43cP86449 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim43cP86449 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim43cP86449 Gm3756-201ENSMUST00000169182 1355 ntBASIC13.68□□□□□ -0.22
Trim43cP86449 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim43cP86449 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim43cP86449 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trim43cP86449 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.68□□□□□ -0.22
Trim43cP86449 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim43cP86449 Gm8038-201ENSMUST00000164674 2044 ntBASIC13.68□□□□□ -0.22
Trim43cP86449 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trim43cP86449 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim43cP86449 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC13.67□□□□□ -0.22
Trim43cP86449 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trim43cP86449 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim43cP86449 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13.67□□□□□ -0.22
Trim43cP86449 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim43cP86449 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim43cP86449 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim43cP86449 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim43cP86449 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Trim43cP86449 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim43cP86449 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trim43cP86449 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trim43cP86449 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim43cP86449 Gm11793-201ENSMUST00000120433 981 ntBASIC13.67□□□□□ -0.22
Trim43cP86449 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trim43cP86449 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC13.67□□□□□ -0.22
Trim43cP86449 Rmrp-201ENSMUST00000157463 271 ntBASIC13.67□□□□□ -0.22
Trim43cP86449 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC13.67□□□□□ -0.22
Trim43cP86449 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Trim43cP86449 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC13.67□□□□□ -0.22
Trim43cP86449 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC13.67□□□□□ -0.22
Trim43cP86449 AC125209.1-201ENSMUST00000225812 766 ntBASIC13.67□□□□□ -0.22
Trim43cP86449 AL732506.1-201ENSMUST00000226420 281 ntBASIC13.67□□□□□ -0.22
Trim43cP86449 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Trim43cP86449 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC13.67□□□□□ -0.22
Trim43cP86449 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim43cP86449 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim43cP86449 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim43cP86449 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim43cP86449 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim43cP86449 Gm37737-201ENSMUST00000195013 1638 ntBASIC13.67□□□□□ -0.22
Trim43cP86449 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim43cP86449 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trim43cP86449 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC13.67□□□□□ -0.22
Trim43cP86449 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43cP86449 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43cP86449 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43cP86449 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43cP86449 Gm6203-201ENSMUST00000209575 1342 ntBASIC13.66□□□□□ -0.22
Trim43cP86449 Gm42706-201ENSMUST00000199733 1910 ntBASIC13.66□□□□□ -0.22
Trim43cP86449 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43cP86449 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43cP86449 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43cP86449 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43cP86449 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43cP86449 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43cP86449 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43cP86449 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43cP86449 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43cP86449 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43cP86449 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trim43cP86449 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC13.66□□□□□ -0.22
Trim43cP86449 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43cP86449 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms