Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcdP82347 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SgcdP82347 AY702102-202ENSMUST00000194651 1173 ntBASIC11.73□□□□□ -0.53
SgcdP82347 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SgcdP82347 Gm43860-201ENSMUST00000201742 2705 ntBASIC11.73□□□□□ -0.53
SgcdP82347 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
SgcdP82347 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC11.73□□□□□ -0.53
SgcdP82347 AC159006.1-201ENSMUST00000226396 258 ntBASIC11.73□□□□□ -0.53
SgcdP82347 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
SgcdP82347 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcdP82347 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcdP82347 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcdP82347 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcdP82347 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcdP82347 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcdP82347 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SgcdP82347 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SgcdP82347 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcdP82347 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SgcdP82347 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcdP82347 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcdP82347 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcdP82347 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcdP82347 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcdP82347 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcdP82347 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.72□□□□□ -0.53
SgcdP82347 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
SgcdP82347 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcdP82347 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcdP82347 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SgcdP82347 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcdP82347 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcdP82347 Gm12742-201ENSMUST00000117326 410 ntBASIC11.72□□□□□ -0.53
SgcdP82347 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC11.72□□□□□ -0.53
SgcdP82347 Gm7820-201ENSMUST00000121012 1052 ntBASIC11.72□□□□□ -0.53
SgcdP82347 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC11.72□□□□□ -0.53
SgcdP82347 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
SgcdP82347 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC11.72□□□□□ -0.53
SgcdP82347 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC11.72□□□□□ -0.53
SgcdP82347 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC11.72□□□□□ -0.53
SgcdP82347 Gm19931-201ENSMUST00000198920 368 ntBASIC11.72□□□□□ -0.53
SgcdP82347 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC11.72□□□□□ -0.53
SgcdP82347 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC11.72□□□□□ -0.53
SgcdP82347 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC11.72□□□□□ -0.53
SgcdP82347 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.72□□□□□ -0.53
SgcdP82347 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
SgcdP82347 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC11.72□□□□□ -0.53
SgcdP82347 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcdP82347 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcdP82347 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcdP82347 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcdP82347 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcdP82347 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcdP82347 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
SgcdP82347 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
SgcdP82347 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.72□□□□□ -0.53
SgcdP82347 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.72□□□□□ -0.53
SgcdP82347 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcdP82347 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
SgcdP82347 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
SgcdP82347 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SgcdP82347 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.72□□□□□ -0.53
SgcdP82347 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
SgcdP82347 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcdP82347 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
SgcdP82347 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.71□□□□□ -0.53
SgcdP82347 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
SgcdP82347 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.71□□□□□ -0.53
SgcdP82347 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SgcdP82347 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SgcdP82347 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.71□□□□□ -0.53
SgcdP82347 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SgcdP82347 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SgcdP82347 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SgcdP82347 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SgcdP82347 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SgcdP82347 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SgcdP82347 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.71□□□□□ -0.53
SgcdP82347 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SgcdP82347 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
SgcdP82347 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SgcdP82347 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
SgcdP82347 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SgcdP82347 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
SgcdP82347 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
SgcdP82347 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SgcdP82347 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SgcdP82347 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SgcdP82347 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
SgcdP82347 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
SgcdP82347 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
SgcdP82347 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SgcdP82347 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SgcdP82347 Gm12585-201ENSMUST00000117307 290 ntBASIC11.71□□□□□ -0.53
SgcdP82347 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SgcdP82347 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC11.71□□□□□ -0.53
SgcdP82347 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SgcdP82347 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SgcdP82347 Rassf8-202ENSMUST00000058538 1131 ntBASIC11.71□□□□□ -0.53
SgcdP82347 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms