Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sec61a1P61620 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC11.12□□□□□ -0.63
Sec61a1P61620 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Sec61a1P61620 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC11.12□□□□□ -0.63
Sec61a1P61620 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC11.12□□□□□ -0.63
Sec61a1P61620 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sec61a1P61620 Gm9396-201ENSMUST00000076703 567 ntBASIC11.12□□□□□ -0.63
Sec61a1P61620 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Sec61a1P61620 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sec61a1P61620 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sec61a1P61620 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sec61a1P61620 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sec61a1P61620 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sec61a1P61620 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sec61a1P61620 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sec61a1P61620 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sec61a1P61620 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sec61a1P61620 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sec61a1P61620 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sec61a1P61620 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sec61a1P61620 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sec61a1P61620 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sec61a1P61620 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sec61a1P61620 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sec61a1P61620 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sec61a1P61620 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sec61a1P61620 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Sec61a1P61620 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sec61a1P61620 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sec61a1P61620 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.11□□□□□ -0.63
Sec61a1P61620 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Sec61a1P61620 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sec61a1P61620 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.11□□□□□ -0.63
Sec61a1P61620 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Sec61a1P61620 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sec61a1P61620 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sec61a1P61620 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Sec61a1P61620 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sec61a1P61620 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sec61a1P61620 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sec61a1P61620 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sec61a1P61620 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sec61a1P61620 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sec61a1P61620 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Sec61a1P61620 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.11□□□□□ -0.63
Sec61a1P61620 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC11.11□□□□□ -0.63
Sec61a1P61620 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sec61a1P61620 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sec61a1P61620 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC11.11□□□□□ -0.63
Sec61a1P61620 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sec61a1P61620 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sec61a1P61620 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.11□□□□□ -0.63
Sec61a1P61620 Mir7085-201ENSMUST00000184353 66 ntBASIC11.11□□□□□ -0.63
Sec61a1P61620 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sec61a1P61620 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC11.11□□□□□ -0.63
Sec61a1P61620 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC11.11□□□□□ -0.63
Sec61a1P61620 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC11.11□□□□□ -0.63
Sec61a1P61620 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.11□□□□□ -0.63
Sec61a1P61620 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sec61a1P61620 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sec61a1P61620 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sec61a1P61620 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sec61a1P61620 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sec61a1P61620 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Sec61a1P61620 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sec61a1P61620 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sec61a1P61620 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sec61a1P61620 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Sec61a1P61620 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sec61a1P61620 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sec61a1P61620 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sec61a1P61620 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sec61a1P61620 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.11□□□□□ -0.63
Sec61a1P61620 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Sec61a1P61620 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sec61a1P61620 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sec61a1P61620 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sec61a1P61620 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Sec61a1P61620 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sec61a1P61620 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sec61a1P61620 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sec61a1P61620 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.1□□□□□ -0.63
Sec61a1P61620 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sec61a1P61620 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sec61a1P61620 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sec61a1P61620 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC11.1□□□□□ -0.63
Sec61a1P61620 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sec61a1P61620 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sec61a1P61620 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sec61a1P61620 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sec61a1P61620 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Sec61a1P61620 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sec61a1P61620 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Sec61a1P61620 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sec61a1P61620 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Sec61a1P61620 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sec61a1P61620 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sec61a1P61620 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sec61a1P61620 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sec61a1P61620 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms