Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cks1bP61025 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cks1bP61025 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cks1bP61025 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Cks1bP61025 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cks1bP61025 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC9.01□□□□□ -0.97
Cks1bP61025 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cks1bP61025 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cks1bP61025 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cks1bP61025 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cks1bP61025 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cks1bP61025 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cks1bP61025 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cks1bP61025 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cks1bP61025 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC9.01□□□□□ -0.97
Cks1bP61025 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC9.01□□□□□ -0.97
Cks1bP61025 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cks1bP61025 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Cks1bP61025 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC9.01□□□□□ -0.97
Cks1bP61025 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Cks1bP61025 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC9.01□□□□□ -0.97
Cks1bP61025 AC156016.3-201ENSMUST00000228623 344 ntBASIC9.01□□□□□ -0.97
Cks1bP61025 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cks1bP61025 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cks1bP61025 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cks1bP61025 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Cks1bP61025 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Cks1bP61025 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cks1bP61025 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cks1bP61025 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cks1bP61025 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC9.01□□□□□ -0.97
Cks1bP61025 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cks1bP61025 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cks1bP61025 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cks1bP61025 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cks1bP61025 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cks1bP61025 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cks1bP61025 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Cks1bP61025 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cks1bP61025 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Cks1bP61025 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cks1bP61025 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cks1bP61025 Slc6a5-203ENSMUST00000207753 6966 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cks1bP61025 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Cks1bP61025 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cks1bP61025 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Cks1bP61025 Slc45a4-207ENSMUST00000151288 7509 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Cks1bP61025 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC9.01□□□□□ -0.97
Cks1bP61025 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC9□□□□□ -0.97
Cks1bP61025 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cks1bP61025 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Cks1bP61025 Arhgef3-204ENSMUST00000225949 3198 ntBASIC9□□□□□ -0.97
Cks1bP61025 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC9□□□□□ -0.97
Cks1bP61025 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
Cks1bP61025 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cks1bP61025 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Cks1bP61025 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC9□□□□□ -0.97
Cks1bP61025 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC9□□□□□ -0.97
Cks1bP61025 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Cks1bP61025 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC9□□□□□ -0.97
Cks1bP61025 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC9□□□□□ -0.97
Cks1bP61025 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cks1bP61025 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC9□□□□□ -0.97
Cks1bP61025 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC9□□□□□ -0.97
Cks1bP61025 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cks1bP61025 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC9□□□□□ -0.97
Cks1bP61025 Gm13365-201ENSMUST00000121188 973 ntBASIC9□□□□□ -0.97
Cks1bP61025 Mir1897-201ENSMUST00000122581 272 ntBASIC9□□□□□ -0.97
Cks1bP61025 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Cks1bP61025 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Cks1bP61025 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Cks1bP61025 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Cks1bP61025 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC9□□□□□ -0.97
Cks1bP61025 Mir6990-201ENSMUST00000183724 91 ntBASIC9□□□□□ -0.97
Cks1bP61025 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC9□□□□□ -0.97
Cks1bP61025 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC9□□□□□ -0.97
Cks1bP61025 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC9□□□□□ -0.97
Cks1bP61025 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC9□□□□□ -0.97
Cks1bP61025 Gm9229-201ENSMUST00000222777 126 ntBASIC9□□□□□ -0.97
Cks1bP61025 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC9□□□□□ -0.97
Cks1bP61025 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
Cks1bP61025 Gm3695-201ENSMUST00000087222 1009 ntBASIC9□□□□□ -0.97
Cks1bP61025 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC9□□□□□ -0.97
Cks1bP61025 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Cks1bP61025 Atad5-201ENSMUST00000017694 7272 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
Cks1bP61025 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cks1bP61025 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cks1bP61025 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC9□□□□□ -0.97
Cks1bP61025 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC9□□□□□ -0.97
Cks1bP61025 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Cks1bP61025 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cks1bP61025 8030423F21Rik-201ENSMUST00000064097 2851 ntTSL 1 (best) BASIC9□□□□□ -0.97
Cks1bP61025 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Cks1bP61025 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
Cks1bP61025 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cks1bP61025 BC035947-201ENSMUST00000170511 3063 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Cks1bP61025 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Cks1bP61025 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Cks1bP61025 Gm45496-201ENSMUST00000209918 2917 ntBASIC9□□□□□ -0.97
Cks1bP61025 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms