Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox2P48432 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox2P48432 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.78□□□□□ -0.52
Sox2P48432 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox2P48432 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox2P48432 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox2P48432 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.78□□□□□ -0.52
Sox2P48432 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Sox2P48432 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.78□□□□□ -0.52
Sox2P48432 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox2P48432 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox2P48432 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox2P48432 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sox2P48432 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.78□□□□□ -0.52
Sox2P48432 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sox2P48432 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sox2P48432 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sox2P48432 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sox2P48432 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sox2P48432 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sox2P48432 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Sox2P48432 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sox2P48432 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sox2P48432 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Sox2P48432 Rubie-203ENSMUST00000227803 2430 ntBASIC11.77□□□□□ -0.52
Sox2P48432 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Sox2P48432 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox2P48432 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sox2P48432 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sox2P48432 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox2P48432 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC11.77□□□□□ -0.53
Sox2P48432 Gm27390-201ENSMUST00000184516 176 ntBASIC11.77□□□□□ -0.53
Sox2P48432 Gm18307-201ENSMUST00000206864 949 ntBASIC11.77□□□□□ -0.53
Sox2P48432 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Sox2P48432 Gm16372-201ENSMUST00000073088 450 ntBASIC11.77□□□□□ -0.53
Sox2P48432 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox2P48432 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox2P48432 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox2P48432 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox2P48432 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.77□□□□□ -0.53
Sox2P48432 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox2P48432 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox2P48432 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox2P48432 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox2P48432 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox2P48432 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox2P48432 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.76□□□□□ -0.53
Sox2P48432 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox2P48432 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox2P48432 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Sox2P48432 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox2P48432 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Sox2P48432 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox2P48432 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox2P48432 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox2P48432 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sox2P48432 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Sox2P48432 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox2P48432 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sox2P48432 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Sox2P48432 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox2P48432 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC11.76□□□□□ -0.53
Sox2P48432 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.76□□□□□ -0.53
Sox2P48432 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Sox2P48432 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC11.76□□□□□ -0.53
Sox2P48432 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC11.76□□□□□ -0.53
Sox2P48432 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Sox2P48432 Gm19220-201ENSMUST00000222682 803 ntBASIC11.76□□□□□ -0.53
Sox2P48432 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC11.76□□□□□ -0.53
Sox2P48432 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox2P48432 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox2P48432 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox2P48432 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.76□□□□□ -0.53
Sox2P48432 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox2P48432 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC11.76□□□□□ -0.53
Sox2P48432 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
Sox2P48432 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox2P48432 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox2P48432 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox2P48432 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox2P48432 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Sox2P48432 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox2P48432 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox2P48432 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sox2P48432 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sox2P48432 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox2P48432 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox2P48432 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox2P48432 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sox2P48432 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox2P48432 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox2P48432 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Sox2P48432 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox2P48432 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox2P48432 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox2P48432 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.75□□□□□ -0.53
Sox2P48432 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox2P48432 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox2P48432 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox2P48432 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms