Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Timp3P39876 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC10.36□□□□□ -0.75
Timp3P39876 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Timp3P39876 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Timp3P39876 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Timp3P39876 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Timp3P39876 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Timp3P39876 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC10.36□□□□□ -0.75
Timp3P39876 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Timp3P39876 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Timp3P39876 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Timp3P39876 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC10.35□□□□□ -0.75
Timp3P39876 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Timp3P39876 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC10.35□□□□□ -0.75
Timp3P39876 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Timp3P39876 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Timp3P39876 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Timp3P39876 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Timp3P39876 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Timp3P39876 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Timp3P39876 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Timp3P39876 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Timp3P39876 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Timp3P39876 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Timp3P39876 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Timp3P39876 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Timp3P39876 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC10.35□□□□□ -0.75
Timp3P39876 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Timp3P39876 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Timp3P39876 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Timp3P39876 Gm17208-201ENSMUST00000168388 535 ntBASIC10.35□□□□□ -0.75
Timp3P39876 Gm3890-201ENSMUST00000182416 207 ntBASIC10.35□□□□□ -0.75
Timp3P39876 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC10.35□□□□□ -0.75
Timp3P39876 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC10.35□□□□□ -0.75
Timp3P39876 Gm38341-201ENSMUST00000195357 515 ntBASIC10.35□□□□□ -0.75
Timp3P39876 Gm10608-202ENSMUST00000213924 676 ntBASIC10.35□□□□□ -0.75
Timp3P39876 CT009713.10-202ENSMUST00000225734 696 ntBASIC10.35□□□□□ -0.75
Timp3P39876 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Timp3P39876 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC10.35□□□□□ -0.75
Timp3P39876 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Timp3P39876 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC10.35□□□□□ -0.75
Timp3P39876 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Timp3P39876 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Timp3P39876 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC10.35□□□□□ -0.75
Timp3P39876 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Timp3P39876 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Timp3P39876 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Timp3P39876 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Timp3P39876 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Timp3P39876 Gm44851-201ENSMUST00000205735 2309 ntBASIC10.35□□□□□ -0.75
Timp3P39876 AC151895.1-201ENSMUST00000219025 1742 ntBASIC10.35□□□□□ -0.75
Timp3P39876 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Timp3P39876 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Timp3P39876 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Timp3P39876 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Timp3P39876 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Timp3P39876 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Timp3P39876 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Timp3P39876 Gm13722-201ENSMUST00000117964 3066 ntBASIC10.35□□□□□ -0.75
Timp3P39876 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Timp3P39876 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Timp3P39876 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Timp3P39876 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
Timp3P39876 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Timp3P39876 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Timp3P39876 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Timp3P39876 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Timp3P39876 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Timp3P39876 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Timp3P39876 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Timp3P39876 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Timp3P39876 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Timp3P39876 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Timp3P39876 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Timp3P39876 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Timp3P39876 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Timp3P39876 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Timp3P39876 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Timp3P39876 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Timp3P39876 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Timp3P39876 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Timp3P39876 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Timp3P39876 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Timp3P39876 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Timp3P39876 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Timp3P39876 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Timp3P39876 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Timp3P39876 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Timp3P39876 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Timp3P39876 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Timp3P39876 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Timp3P39876 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC10.34□□□□□ -0.75
Timp3P39876 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Timp3P39876 Gm4986-201ENSMUST00000119731 549 ntBASIC10.34□□□□□ -0.75
Timp3P39876 Gm9431-201ENSMUST00000119765 1051 ntBASIC10.34□□□□□ -0.75
Timp3P39876 Gm13350-201ENSMUST00000120519 479 ntBASIC10.34□□□□□ -0.75
Timp3P39876 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC10.34□□□□□ -0.75
Timp3P39876 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Timp3P39876 Gm5896-201ENSMUST00000189662 1024 ntBASIC10.34□□□□□ -0.75
Timp3P39876 Gm43758-201ENSMUST00000199500 367 ntBASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms