Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Thbs1P35441 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Thbs1P35441 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Thbs1P35441 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Thbs1P35441 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Thbs1P35441 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Thbs1P35441 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Thbs1P35441 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Thbs1P35441 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Thbs1P35441 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Thbs1P35441 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.7□□□□□ -0.54
Thbs1P35441 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Thbs1P35441 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC11.7□□□□□ -0.54
Thbs1P35441 Tbata-209ENSMUST00000148181 1017 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Thbs1P35441 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.7□□□□□ -0.54
Thbs1P35441 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Thbs1P35441 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Thbs1P35441 Gm7029-201ENSMUST00000173226 450 ntBASIC11.7□□□□□ -0.54
Thbs1P35441 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Thbs1P35441 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Thbs1P35441 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Thbs1P35441 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.7□□□□□ -0.54
Thbs1P35441 Gm45359-201ENSMUST00000210635 427 ntBASIC11.7□□□□□ -0.54
Thbs1P35441 Kcnk16-202ENSMUST00000225596 2127 ntBASIC11.7□□□□□ -0.54
Thbs1P35441 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Thbs1P35441 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Thbs1P35441 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Thbs1P35441 Gm6091-201ENSMUST00000098307 165 ntBASIC11.7□□□□□ -0.54
Thbs1P35441 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Thbs1P35441 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.7□□□□□ -0.54
Thbs1P35441 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Thbs1P35441 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Thbs1P35441 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.7□□□□□ -0.54
Thbs1P35441 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Thbs1P35441 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Thbs1P35441 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Thbs1P35441 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Thbs1P35441 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Thbs1P35441 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.7□□□□□ -0.54
Thbs1P35441 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.7□□□□□ -0.54
Thbs1P35441 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Thbs1P35441 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Thbs1P35441 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.69□□□□□ -0.54
Thbs1P35441 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Thbs1P35441 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Thbs1P35441 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Thbs1P35441 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Thbs1P35441 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.69□□□□□ -0.54
Thbs1P35441 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Thbs1P35441 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Thbs1P35441 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.69□□□□□ -0.54
Thbs1P35441 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Thbs1P35441 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Thbs1P35441 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Thbs1P35441 Gm12384-201ENSMUST00000119228 919 ntBASIC11.69□□□□□ -0.54
Thbs1P35441 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.69□□□□□ -0.54
Thbs1P35441 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.69□□□□□ -0.54
Thbs1P35441 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.69□□□□□ -0.54
Thbs1P35441 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.69□□□□□ -0.54
Thbs1P35441 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Thbs1P35441 Snora78-201ENSMUST00000158630 128 ntBASIC11.69□□□□□ -0.54
Thbs1P35441 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Thbs1P35441 Gm8835-201ENSMUST00000173096 1169 ntBASIC11.69□□□□□ -0.54
Thbs1P35441 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Thbs1P35441 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Thbs1P35441 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Thbs1P35441 Gm28923-201ENSMUST00000187755 322 ntBASIC11.69□□□□□ -0.54
Thbs1P35441 Gm42726-201ENSMUST00000202274 1286 ntTSL 5 BASIC11.69□□□□□ -0.54
Thbs1P35441 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.69□□□□□ -0.54
Thbs1P35441 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC11.69□□□□□ -0.54
Thbs1P35441 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.69□□□□□ -0.54
Thbs1P35441 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Thbs1P35441 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Thbs1P35441 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Thbs1P35441 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Thbs1P35441 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Thbs1P35441 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Thbs1P35441 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.69□□□□□ -0.54
Thbs1P35441 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.69□□□□□ -0.54
Thbs1P35441 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.69□□□□□ -0.54
Thbs1P35441 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Thbs1P35441 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Thbs1P35441 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Thbs1P35441 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Thbs1P35441 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Thbs1P35441 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Thbs1P35441 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Thbs1P35441 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Thbs1P35441 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Thbs1P35441 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Thbs1P35441 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Thbs1P35441 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Thbs1P35441 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.68□□□□□ -0.54
Thbs1P35441 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Thbs1P35441 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC11.68□□□□□ -0.54
Thbs1P35441 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Thbs1P35441 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Thbs1P35441 Gm13333-201ENSMUST00000119424 781 ntBASIC11.68□□□□□ -0.54
Thbs1P35441 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.68□□□□□ -0.54
Thbs1P35441 Gm13780-201ENSMUST00000150482 1187 ntTSL 5 BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms