Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col2a1P28481 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col2a1P28481 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col2a1P28481 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col2a1P28481 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col2a1P28481 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col2a1P28481 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col2a1P28481 Mir1943-201ENSMUST00000158276 73 ntBASIC14.09□□□□□ -0.15
Col2a1P28481 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC14.09□□□□□ -0.15
Col2a1P28481 Ighv1-48-201ENSMUST00000191795 294 ntBASIC14.09□□□□□ -0.15
Col2a1P28481 Gm42682-201ENSMUST00000198349 1265 ntBASIC14.09□□□□□ -0.15
Col2a1P28481 Gm18893-201ENSMUST00000198416 943 ntBASIC14.09□□□□□ -0.15
Col2a1P28481 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col2a1P28481 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col2a1P28481 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC14.09□□□□□ -0.15
Col2a1P28481 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col2a1P28481 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col2a1P28481 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC14.09□□□□□ -0.15
Col2a1P28481 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Col2a1P28481 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Col2a1P28481 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Col2a1P28481 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col2a1P28481 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col2a1P28481 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col2a1P28481 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col2a1P28481 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col2a1P28481 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC14.08□□□□□ -0.16
Col2a1P28481 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Col2a1P28481 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col2a1P28481 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC14.08□□□□□ -0.16
Col2a1P28481 Gm5733-201ENSMUST00000190232 939 ntBASIC14.08□□□□□ -0.16
Col2a1P28481 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col2a1P28481 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col2a1P28481 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC14.08□□□□□ -0.16
Col2a1P28481 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC14.08□□□□□ -0.16
Col2a1P28481 AC154276.3-201ENSMUST00000227643 998 ntBASIC14.08□□□□□ -0.16
Col2a1P28481 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col2a1P28481 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col2a1P28481 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col2a1P28481 Gm28323-201ENSMUST00000186817 2499 ntBASIC14.08□□□□□ -0.16
Col2a1P28481 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col2a1P28481 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col2a1P28481 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col2a1P28481 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col2a1P28481 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
Col2a1P28481 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Col2a1P28481 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col2a1P28481 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Col2a1P28481 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.08□□□□□ -0.16
Col2a1P28481 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col2a1P28481 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col2a1P28481 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC14.08□□□□□ -0.16
Col2a1P28481 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col2a1P28481 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col2a1P28481 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.08□□□□□ -0.16
Col2a1P28481 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col2a1P28481 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col2a1P28481 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col2a1P28481 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col2a1P28481 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col2a1P28481 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col2a1P28481 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col2a1P28481 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.07□□□□□ -0.16
Col2a1P28481 Gm15595-201ENSMUST00000120840 961 ntBASIC14.07□□□□□ -0.16
Col2a1P28481 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC14.07□□□□□ -0.16
Col2a1P28481 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col2a1P28481 Gm37835-201ENSMUST00000193305 361 ntBASIC14.07□□□□□ -0.16
Col2a1P28481 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC14.07□□□□□ -0.16
Col2a1P28481 Gm45770-201ENSMUST00000212105 616 ntBASIC14.07□□□□□ -0.16
Col2a1P28481 Gm45909-201ENSMUST00000212413 1031 ntBASIC14.07□□□□□ -0.16
Col2a1P28481 Gm9797-202ENSMUST00000218003 294 ntBASIC14.07□□□□□ -0.16
Col2a1P28481 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col2a1P28481 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col2a1P28481 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.07□□□□□ -0.16
Col2a1P28481 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC14.07□□□□□ -0.16
Col2a1P28481 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col2a1P28481 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Col2a1P28481 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col2a1P28481 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col2a1P28481 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col2a1P28481 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col2a1P28481 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
Col2a1P28481 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col2a1P28481 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Col2a1P28481 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col2a1P28481 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col2a1P28481 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col2a1P28481 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col2a1P28481 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col2a1P28481 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col2a1P28481 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Col2a1P28481 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col2a1P28481 Gm37437-201ENSMUST00000194451 1937 ntBASIC14.07□□□□□ -0.16
Col2a1P28481 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col2a1P28481 Gm43677-201ENSMUST00000198098 2378 ntBASIC14.07□□□□□ -0.16
Col2a1P28481 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col2a1P28481 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Col2a1P28481 Gm12165-201ENSMUST00000117047 342 ntBASIC14.06□□□□□ -0.16
Col2a1P28481 Gm15004-201ENSMUST00000119192 630 ntBASIC14.06□□□□□ -0.16
Col2a1P28481 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms