Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
BdnfP21237 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
BdnfP21237 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
BdnfP21237 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.1□□□□□ -0.47
BdnfP21237 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
BdnfP21237 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
BdnfP21237 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.1□□□□□ -0.47
BdnfP21237 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
BdnfP21237 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
BdnfP21237 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
BdnfP21237 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
BdnfP21237 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.1□□□□□ -0.47
BdnfP21237 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
BdnfP21237 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
BdnfP21237 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
BdnfP21237 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
BdnfP21237 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
BdnfP21237 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
BdnfP21237 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
BdnfP21237 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
BdnfP21237 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
BdnfP21237 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
BdnfP21237 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
BdnfP21237 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
BdnfP21237 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.09□□□□□ -0.47
BdnfP21237 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
BdnfP21237 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
BdnfP21237 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
BdnfP21237 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
BdnfP21237 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
BdnfP21237 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.09□□□□□ -0.47
BdnfP21237 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.09□□□□□ -0.47
BdnfP21237 Gm14928-201ENSMUST00000120198 477 ntBASIC12.09□□□□□ -0.47
BdnfP21237 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
BdnfP21237 Gm23984-201ENSMUST00000157139 203 ntBASIC12.09□□□□□ -0.47
BdnfP21237 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
BdnfP21237 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.09□□□□□ -0.47
BdnfP21237 Gm28911-201ENSMUST00000188837 117 ntBASIC12.09□□□□□ -0.47
BdnfP21237 Gm18018-201ENSMUST00000198273 408 ntBASIC12.09□□□□□ -0.47
BdnfP21237 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
BdnfP21237 AC154532.1-201ENSMUST00000227860 965 ntBASIC12.09□□□□□ -0.47
BdnfP21237 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
BdnfP21237 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
BdnfP21237 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
BdnfP21237 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
BdnfP21237 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
BdnfP21237 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
BdnfP21237 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC12.09□□□□□ -0.47
BdnfP21237 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.09□□□□□ -0.47
BdnfP21237 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
BdnfP21237 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
BdnfP21237 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
BdnfP21237 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
BdnfP21237 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC12.09□□□□□ -0.47
BdnfP21237 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
BdnfP21237 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
BdnfP21237 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.09□□□□□ -0.47
BdnfP21237 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.09□□□□□ -0.47
BdnfP21237 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
BdnfP21237 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
BdnfP21237 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
BdnfP21237 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.08□□□□□ -0.47
BdnfP21237 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
BdnfP21237 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
BdnfP21237 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
BdnfP21237 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
BdnfP21237 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
BdnfP21237 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
BdnfP21237 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
BdnfP21237 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
BdnfP21237 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
BdnfP21237 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
BdnfP21237 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
BdnfP21237 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
BdnfP21237 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
BdnfP21237 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.08□□□□□ -0.48
BdnfP21237 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.08□□□□□ -0.48
BdnfP21237 Gm8463-201ENSMUST00000208573 613 ntBASIC12.08□□□□□ -0.48
BdnfP21237 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
BdnfP21237 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.08□□□□□ -0.48
BdnfP21237 Gm26035-201ENSMUST00000083065 308 ntBASIC12.08□□□□□ -0.48
BdnfP21237 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
BdnfP21237 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
BdnfP21237 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.08□□□□□ -0.48
BdnfP21237 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
BdnfP21237 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.08□□□□□ -0.48
BdnfP21237 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.08□□□□□ -0.48
BdnfP21237 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
BdnfP21237 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
BdnfP21237 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
BdnfP21237 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
BdnfP21237 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
BdnfP21237 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
BdnfP21237 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
BdnfP21237 AC121870.2-201ENSMUST00000214343 1870 ntBASIC12.08□□□□□ -0.48
BdnfP21237 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
BdnfP21237 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
BdnfP21237 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
BdnfP21237 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
BdnfP21237 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms