Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hmga1P17095 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmga1P17095 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmga1P17095 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmga1P17095 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hmga1P17095 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Hmga1P17095 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmga1P17095 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Hmga1P17095 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmga1P17095 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hmga1P17095 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmga1P17095 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.82□□□□□ -0.36
Hmga1P17095 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmga1P17095 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmga1P17095 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmga1P17095 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmga1P17095 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmga1P17095 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmga1P17095 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmga1P17095 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmga1P17095 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmga1P17095 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmga1P17095 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmga1P17095 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmga1P17095 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Hmga1P17095 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmga1P17095 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmga1P17095 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmga1P17095 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmga1P17095 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmga1P17095 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmga1P17095 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmga1P17095 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Hmga1P17095 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmga1P17095 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmga1P17095 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hmga1P17095 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hmga1P17095 Mir5120-201ENSMUST00000175020 78 ntBASIC12.81□□□□□ -0.36
Hmga1P17095 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Hmga1P17095 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hmga1P17095 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmga1P17095 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Hmga1P17095 Gm17812-201ENSMUST00000204935 318 ntBASIC12.81□□□□□ -0.36
Hmga1P17095 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.81□□□□□ -0.36
Hmga1P17095 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.81□□□□□ -0.36
Hmga1P17095 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmga1P17095 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmga1P17095 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hmga1P17095 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.81□□□□□ -0.36
Hmga1P17095 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hmga1P17095 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmga1P17095 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.81□□□□□ -0.36
Hmga1P17095 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Hmga1P17095 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmga1P17095 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.81□□□□□ -0.36
Hmga1P17095 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmga1P17095 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmga1P17095 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Hmga1P17095 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmga1P17095 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hmga1P17095 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmga1P17095 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hmga1P17095 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmga1P17095 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmga1P17095 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hmga1P17095 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmga1P17095 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmga1P17095 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.8□□□□□ -0.36
Hmga1P17095 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Hmga1P17095 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hmga1P17095 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hmga1P17095 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmga1P17095 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmga1P17095 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmga1P17095 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmga1P17095 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmga1P17095 Gm23200-201ENSMUST00000104379 132 ntBASIC12.8□□□□□ -0.36
Hmga1P17095 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.8□□□□□ -0.36
Hmga1P17095 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmga1P17095 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmga1P17095 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Hmga1P17095 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.8□□□□□ -0.36
Hmga1P17095 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Hmga1P17095 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Hmga1P17095 Gm25732-201ENSMUST00000175168 60 ntBASIC12.8□□□□□ -0.36
Hmga1P17095 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC12.8□□□□□ -0.36
Hmga1P17095 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.8□□□□□ -0.36
Hmga1P17095 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.8□□□□□ -0.36
Hmga1P17095 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.8□□□□□ -0.36
Hmga1P17095 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmga1P17095 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmga1P17095 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hmga1P17095 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Hmga1P17095 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmga1P17095 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmga1P17095 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmga1P17095 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmga1P17095 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmga1P17095 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmga1P17095 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms