Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Hbb-b1P02088 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC8.82□□□□□ -1
Hbb-b1P02088 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC8.82□□□□□ -1
Hbb-b1P02088 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Hbb-b1P02088 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Hbb-b1P02088 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Hbb-b1P02088 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Hbb-b1P02088 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC8.82□□□□□ -1
Hbb-b1P02088 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Hbb-b1P02088 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC8.82□□□□□ -1
Hbb-b1P02088 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Hbb-b1P02088 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Hbb-b1P02088 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Hbb-b1P02088 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Hbb-b1P02088 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Hbb-b1P02088 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Hbb-b1P02088 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Hbb-b1P02088 Gm17244-201ENSMUST00000192482 3416 ntBASIC8.82□□□□□ -1
Hbb-b1P02088 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC8.82□□□□□ -1
Hbb-b1P02088 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Hbb-b1P02088 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC8.81□□□□□ -1
Hbb-b1P02088 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Hbb-b1P02088 AC153506.1-201ENSMUST00000218768 2915 ntBASIC8.81□□□□□ -1
Hbb-b1P02088 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Hbb-b1P02088 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Hbb-b1P02088 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Hbb-b1P02088 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Hbb-b1P02088 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Hbb-b1P02088 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Hbb-b1P02088 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC8.81□□□□□ -1
Hbb-b1P02088 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC8.81□□□□□ -1
Hbb-b1P02088 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Hbb-b1P02088 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Hbb-b1P02088 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Hbb-b1P02088 Myo5a-206ENSMUST00000136731 6480 ntAPPRIS ALT1 TSL 5 BASIC8.81□□□□□ -1
Hbb-b1P02088 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Hbb-b1P02088 Gm5124-202ENSMUST00000132683 2083 ntBASIC8.81□□□□□ -1
Hbb-b1P02088 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Hbb-b1P02088 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Hbb-b1P02088 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Hbb-b1P02088 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Hbb-b1P02088 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC8.81□□□□□ -1
Hbb-b1P02088 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Hbb-b1P02088 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
Hbb-b1P02088 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC8.81□□□□□ -1
Hbb-b1P02088 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC8.81□□□□□ -1
Hbb-b1P02088 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC8.81□□□□□ -1
Hbb-b1P02088 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC8.81□□□□□ -1
Hbb-b1P02088 Gm21470-201ENSMUST00000187680 696 ntBASIC8.81□□□□□ -1
Hbb-b1P02088 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
Hbb-b1P02088 Gm6916-202ENSMUST00000205523 195 ntBASIC8.81□□□□□ -1
Hbb-b1P02088 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC8.81□□□□□ -1
Hbb-b1P02088 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC8.81□□□□□ -1
Hbb-b1P02088 AC132317.1-201ENSMUST00000227227 962 ntBASIC8.81□□□□□ -1
Hbb-b1P02088 AC134335.2-201ENSMUST00000227660 440 ntBASIC8.81□□□□□ -1
Hbb-b1P02088 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Hbb-b1P02088 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Hbb-b1P02088 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Hbb-b1P02088 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC8.81□□□□□ -1
Hbb-b1P02088 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Hbb-b1P02088 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Hbb-b1P02088 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Hbb-b1P02088 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Hbb-b1P02088 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC8.81□□□□□ -1
Hbb-b1P02088 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Hbb-b1P02088 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Hbb-b1P02088 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC8.81□□□□□ -1
Hbb-b1P02088 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC8.81□□□□□ -1
Hbb-b1P02088 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC8.81□□□□□ -1
Hbb-b1P02088 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Hbb-b1P02088 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Hbb-b1P02088 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC8.81□□□□□ -1
Hbb-b1P02088 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Hbb-b1P02088 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Hbb-b1P02088 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC8.81□□□□□ -1
Hbb-b1P02088 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC8.81□□□□□ -1
Hbb-b1P02088 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Hbb-b1P02088 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Hbb-b1P02088 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Hbb-b1P02088 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Hbb-b1P02088 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Hbb-b1P02088 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Hbb-b1P02088 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Hbb-b1P02088 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Hbb-b1P02088 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC8.8□□□□□ -1
Hbb-b1P02088 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Hbb-b1P02088 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
Hbb-b1P02088 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Hbb-b1P02088 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
Hbb-b1P02088 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC8.8□□□□□ -1
Hbb-b1P02088 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Hbb-b1P02088 AC159195.3-201ENSMUST00000225162 2211 ntBASIC8.8□□□□□ -1
Hbb-b1P02088 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Hbb-b1P02088 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Hbb-b1P02088 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Hbb-b1P02088 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Hbb-b1P02088 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Hbb-b1P02088 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Hbb-b1P02088 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Hbb-b1P02088 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms