Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Ttc3O88196 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ttc3O88196 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ttc3O88196 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Ttc3O88196 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Ttc3O88196 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Ttc3O88196 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ttc3O88196 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ttc3O88196 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ttc3O88196 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.1□□□□□ -0.31
Ttc3O88196 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ttc3O88196 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.1□□□□□ -0.31
Ttc3O88196 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ttc3O88196 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC13.1□□□□□ -0.31
Ttc3O88196 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ttc3O88196 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
Ttc3O88196 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ttc3O88196 Gm27627-201ENSMUST00000183644 150 ntBASIC13.1□□□□□ -0.31
Ttc3O88196 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC13.1□□□□□ -0.31
Ttc3O88196 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC13.1□□□□□ -0.31
Ttc3O88196 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ttc3O88196 AC154276.3-201ENSMUST00000227643 998 ntBASIC13.1□□□□□ -0.31
Ttc3O88196 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Ttc3O88196 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ttc3O88196 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ttc3O88196 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ttc3O88196 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ttc3O88196 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Ttc3O88196 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ttc3O88196 AC123619.2-202ENSMUST00000225097 1568 ntBASIC13.1□□□□□ -0.31
Ttc3O88196 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.1□□□□□ -0.31
Ttc3O88196 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ttc3O88196 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Ttc3O88196 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ttc3O88196 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ttc3O88196 Gm44942-201ENSMUST00000096093 2072 ntBASIC13.09□□□□□ -0.31
Ttc3O88196 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ttc3O88196 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ttc3O88196 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ttc3O88196 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ttc3O88196 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC13.09□□□□□ -0.31
Ttc3O88196 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC13.09□□□□□ -0.31
Ttc3O88196 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC13.09□□□□□ -0.31
Ttc3O88196 Gm44136-201ENSMUST00000203819 1106 ntBASIC13.09□□□□□ -0.31
Ttc3O88196 Gm45598-202ENSMUST00000210719 986 ntBASIC13.09□□□□□ -0.31
Ttc3O88196 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ttc3O88196 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
Ttc3O88196 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ttc3O88196 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ttc3O88196 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ttc3O88196 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ttc3O88196 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.09□□□□□ -0.31
Ttc3O88196 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC13.09□□□□□ -0.31
Ttc3O88196 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ttc3O88196 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ttc3O88196 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ttc3O88196 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ttc3O88196 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ttc3O88196 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ttc3O88196 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ttc3O88196 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ttc3O88196 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ttc3O88196 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ttc3O88196 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.09□□□□□ -0.31
Ttc3O88196 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ttc3O88196 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ttc3O88196 Gm14263-201ENSMUST00000117955 746 ntBASIC13.09□□□□□ -0.31
Ttc3O88196 Gm18393-201ENSMUST00000208349 1131 ntBASIC13.09□□□□□ -0.31
Ttc3O88196 AC154680.1-201ENSMUST00000224376 859 ntBASIC13.09□□□□□ -0.31
Ttc3O88196 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC13.09□□□□□ -0.31
Ttc3O88196 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ttc3O88196 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ttc3O88196 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ttc3O88196 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ttc3O88196 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ttc3O88196 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ttc3O88196 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Ttc3O88196 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ttc3O88196 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ttc3O88196 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Ttc3O88196 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ttc3O88196 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ttc3O88196 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ttc3O88196 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ttc3O88196 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ttc3O88196 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Ttc3O88196 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Ttc3O88196 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ttc3O88196 Gm12266-201ENSMUST00000120311 962 ntBASIC13.08□□□□□ -0.32
Ttc3O88196 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC13.08□□□□□ -0.32
Ttc3O88196 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ttc3O88196 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ttc3O88196 AC153954.1-201ENSMUST00000216959 255 ntBASIC13.08□□□□□ -0.32
Ttc3O88196 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ttc3O88196 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ttc3O88196 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ttc3O88196 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ttc3O88196 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ttc3O88196 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ttc3O88196 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms