Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trdmt1O55055 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.19
Trdmt1O55055 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.83□□□□□ -0.19
Trdmt1O55055 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trdmt1O55055 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.19
Trdmt1O55055 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Trdmt1O55055 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trdmt1O55055 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trdmt1O55055 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trdmt1O55055 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.83□□□□□ -0.2
Trdmt1O55055 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trdmt1O55055 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trdmt1O55055 Gm13035-201ENSMUST00000117496 342 ntBASIC13.83□□□□□ -0.2
Trdmt1O55055 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Trdmt1O55055 Gm270-201ENSMUST00000223010 976 ntBASIC13.83□□□□□ -0.2
Trdmt1O55055 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trdmt1O55055 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trdmt1O55055 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trdmt1O55055 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trdmt1O55055 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trdmt1O55055 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trdmt1O55055 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trdmt1O55055 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trdmt1O55055 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trdmt1O55055 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trdmt1O55055 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trdmt1O55055 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trdmt1O55055 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trdmt1O55055 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trdmt1O55055 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC13.83□□□□□ -0.2
Trdmt1O55055 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.83□□□□□ -0.2
Trdmt1O55055 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Trdmt1O55055 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trdmt1O55055 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trdmt1O55055 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trdmt1O55055 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.82□□□□□ -0.2
Trdmt1O55055 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trdmt1O55055 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trdmt1O55055 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trdmt1O55055 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trdmt1O55055 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.82□□□□□ -0.2
Trdmt1O55055 Gm14058-201ENSMUST00000116082 735 ntBASIC13.82□□□□□ -0.2
Trdmt1O55055 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC13.82□□□□□ -0.2
Trdmt1O55055 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trdmt1O55055 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trdmt1O55055 Mir7032-201ENSMUST00000185154 79 ntBASIC13.82□□□□□ -0.2
Trdmt1O55055 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC13.82□□□□□ -0.2
Trdmt1O55055 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC13.82□□□□□ -0.2
Trdmt1O55055 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC13.82□□□□□ -0.2
Trdmt1O55055 Gm17827-201ENSMUST00000211825 742 ntBASIC13.82□□□□□ -0.2
Trdmt1O55055 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trdmt1O55055 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trdmt1O55055 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trdmt1O55055 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trdmt1O55055 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trdmt1O55055 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trdmt1O55055 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Trdmt1O55055 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trdmt1O55055 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trdmt1O55055 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trdmt1O55055 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trdmt1O55055 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trdmt1O55055 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trdmt1O55055 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trdmt1O55055 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.81□□□□□ -0.2
Trdmt1O55055 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trdmt1O55055 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trdmt1O55055 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trdmt1O55055 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trdmt1O55055 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trdmt1O55055 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trdmt1O55055 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trdmt1O55055 Gm12165-201ENSMUST00000117047 342 ntBASIC13.81□□□□□ -0.2
Trdmt1O55055 Gm6506-201ENSMUST00000119775 1136 ntBASIC13.81□□□□□ -0.2
Trdmt1O55055 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC13.81□□□□□ -0.2
Trdmt1O55055 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC13.81□□□□□ -0.2
Trdmt1O55055 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trdmt1O55055 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC13.81□□□□□ -0.2
Trdmt1O55055 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC13.81□□□□□ -0.2
Trdmt1O55055 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC13.81□□□□□ -0.2
Trdmt1O55055 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC13.81□□□□□ -0.2
Trdmt1O55055 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC13.81□□□□□ -0.2
Trdmt1O55055 Gm5051-201ENSMUST00000204085 485 ntBASIC13.81□□□□□ -0.2
Trdmt1O55055 AC141438.2-201ENSMUST00000215068 271 ntBASIC13.81□□□□□ -0.2
Trdmt1O55055 AC135114.1-201ENSMUST00000228682 270 ntBASIC13.81□□□□□ -0.2
Trdmt1O55055 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC13.81□□□□□ -0.2
Trdmt1O55055 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trdmt1O55055 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trdmt1O55055 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.81□□□□□ -0.2
Trdmt1O55055 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trdmt1O55055 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trdmt1O55055 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC13.81□□□□□ -0.2
Trdmt1O55055 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC13.81□□□□□ -0.2
Trdmt1O55055 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trdmt1O55055 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trdmt1O55055 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trdmt1O55055 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trdmt1O55055 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trdmt1O55055 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trdmt1O55055 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms