Protein–RNA interactions for Protein: O35655

Ppef1, Serine/threonine-protein phosphatase with EF-hands 1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppef1O35655 AC154759.1-201ENSMUST00000224137 1159 ntBASIC14.61□□□□□ -0.07
Ppef1O35655 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ppef1O35655 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ppef1O35655 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Ppef1O35655 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ppef1O35655 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ppef1O35655 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ppef1O35655 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ppef1O35655 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ppef1O35655 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC14.61□□□□□ -0.07
Ppef1O35655 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ppef1O35655 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ppef1O35655 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Ppef1O35655 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ppef1O35655 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ppef1O35655 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC14.6□□□□□ -0.07
Ppef1O35655 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ppef1O35655 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ppef1O35655 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ppef1O35655 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ppef1O35655 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ppef1O35655 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ppef1O35655 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ppef1O35655 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ppef1O35655 Gm23132-201ENSMUST00000104254 132 ntBASIC14.6□□□□□ -0.07
Ppef1O35655 Gm23769-201ENSMUST00000104441 121 ntBASIC14.6□□□□□ -0.07
Ppef1O35655 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ppef1O35655 Gm6322-201ENSMUST00000118789 1004 ntBASIC14.6□□□□□ -0.07
Ppef1O35655 Gm12345-201ENSMUST00000119288 898 ntBASIC14.6□□□□□ -0.07
Ppef1O35655 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC14.6□□□□□ -0.07
Ppef1O35655 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ppef1O35655 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ppef1O35655 Kif4-ps-202ENSMUST00000185083 652 ntBASIC14.6□□□□□ -0.07
Ppef1O35655 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ppef1O35655 CT025603.1-201ENSMUST00000224040 448 ntBASIC14.6□□□□□ -0.07
Ppef1O35655 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC14.6□□□□□ -0.07
Ppef1O35655 Gm5451-201ENSMUST00000080545 579 ntBASIC14.6□□□□□ -0.07
Ppef1O35655 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ppef1O35655 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ppef1O35655 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ppef1O35655 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ppef1O35655 Gm31138-201ENSMUST00000212296 1705 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ppef1O35655 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ppef1O35655 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ppef1O35655 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
Ppef1O35655 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ppef1O35655 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Ppef1O35655 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ppef1O35655 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Ppef1O35655 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ppef1O35655 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ppef1O35655 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ppef1O35655 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.59□□□□□ -0.07
Ppef1O35655 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ppef1O35655 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ppef1O35655 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ppef1O35655 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ppef1O35655 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ppef1O35655 Gm23595-201ENSMUST00000104306 130 ntBASIC14.59□□□□□ -0.07
Ppef1O35655 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC14.59□□□□□ -0.07
Ppef1O35655 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC14.59□□□□□ -0.07
Ppef1O35655 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC14.59□□□□□ -0.07
Ppef1O35655 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ppef1O35655 4930524O07Rik-202ENSMUST00000162334 293 ntTSL 2 BASIC14.59□□□□□ -0.07
Ppef1O35655 Gm18776-201ENSMUST00000188833 654 ntBASIC14.59□□□□□ -0.07
Ppef1O35655 Gm6606-201ENSMUST00000193613 947 ntBASIC14.59□□□□□ -0.07
Ppef1O35655 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC14.59□□□□□ -0.07
Ppef1O35655 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ppef1O35655 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ppef1O35655 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ppef1O35655 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC14.59□□□□□ -0.07
Ppef1O35655 Gm3635-201ENSMUST00000212314 354 ntBASIC14.59□□□□□ -0.07
Ppef1O35655 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Ppef1O35655 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Ppef1O35655 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Ppef1O35655 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Ppef1O35655 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ppef1O35655 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Ppef1O35655 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ppef1O35655 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ppef1O35655 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ppef1O35655 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ppef1O35655 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
Ppef1O35655 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ppef1O35655 Gm43273-201ENSMUST00000199649 2594 ntBASIC14.59□□□□□ -0.07
Ppef1O35655 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ppef1O35655 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Ppef1O35655 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ppef1O35655 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.58□□□□□ -0.07
Ppef1O35655 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ppef1O35655 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC14.58□□□□□ -0.07
Ppef1O35655 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Ppef1O35655 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Ppef1O35655 Gm13910-201ENSMUST00000121752 1428 ntBASIC14.58□□□□□ -0.07
Ppef1O35655 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Ppef1O35655 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ppef1O35655 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ppef1O35655 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Ppef1O35655 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ppef1O35655 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms