Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim55G3X8Y1 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trim55G3X8Y1 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim55G3X8Y1 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC12.91□□□□□ -0.34
Trim55G3X8Y1 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim55G3X8Y1 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim55G3X8Y1 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim55G3X8Y1 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim55G3X8Y1 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC12.91□□□□□ -0.34
Trim55G3X8Y1 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim55G3X8Y1 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trim55G3X8Y1 Gm11543-201ENSMUST00000120758 370 ntBASIC12.91□□□□□ -0.34
Trim55G3X8Y1 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC12.91□□□□□ -0.34
Trim55G3X8Y1 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.91□□□□□ -0.34
Trim55G3X8Y1 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Trim55G3X8Y1 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim55G3X8Y1 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC12.91□□□□□ -0.34
Trim55G3X8Y1 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim55G3X8Y1 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim55G3X8Y1 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.91□□□□□ -0.34
Trim55G3X8Y1 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim55G3X8Y1 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC12.91□□□□□ -0.34
Trim55G3X8Y1 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim55G3X8Y1 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim55G3X8Y1 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim55G3X8Y1 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.91□□□□□ -0.34
Trim55G3X8Y1 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim55G3X8Y1 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC12.91□□□□□ -0.34
Trim55G3X8Y1 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim55G3X8Y1 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trim55G3X8Y1 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim55G3X8Y1 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.91□□□□□ -0.34
Trim55G3X8Y1 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Trim55G3X8Y1 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC12.91□□□□□ -0.34
Trim55G3X8Y1 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim55G3X8Y1 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim55G3X8Y1 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim55G3X8Y1 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim55G3X8Y1 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trim55G3X8Y1 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trim55G3X8Y1 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC12.9□□□□□ -0.34
Trim55G3X8Y1 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim55G3X8Y1 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.9□□□□□ -0.34
Trim55G3X8Y1 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim55G3X8Y1 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trim55G3X8Y1 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim55G3X8Y1 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim55G3X8Y1 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim55G3X8Y1 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim55G3X8Y1 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim55G3X8Y1 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trim55G3X8Y1 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim55G3X8Y1 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim55G3X8Y1 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim55G3X8Y1 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim55G3X8Y1 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
Trim55G3X8Y1 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim55G3X8Y1 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim55G3X8Y1 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Trim55G3X8Y1 Gm15427-201ENSMUST00000117288 531 ntBASIC12.9□□□□□ -0.34
Trim55G3X8Y1 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC12.9□□□□□ -0.34
Trim55G3X8Y1 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC12.9□□□□□ -0.34
Trim55G3X8Y1 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12.9□□□□□ -0.34
Trim55G3X8Y1 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trim55G3X8Y1 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim55G3X8Y1 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trim55G3X8Y1 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim55G3X8Y1 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Trim55G3X8Y1 Gm38055-201ENSMUST00000195353 2217 ntBASIC12.9□□□□□ -0.34
Trim55G3X8Y1 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim55G3X8Y1 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim55G3X8Y1 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim55G3X8Y1 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Trim55G3X8Y1 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim55G3X8Y1 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC12.9□□□□□ -0.34
Trim55G3X8Y1 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim55G3X8Y1 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim55G3X8Y1 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim55G3X8Y1 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trim55G3X8Y1 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trim55G3X8Y1 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trim55G3X8Y1 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim55G3X8Y1 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim55G3X8Y1 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim55G3X8Y1 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim55G3X8Y1 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim55G3X8Y1 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trim55G3X8Y1 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim55G3X8Y1 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim55G3X8Y1 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim55G3X8Y1 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim55G3X8Y1 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.89□□□□□ -0.35
Trim55G3X8Y1 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.89□□□□□ -0.35
Trim55G3X8Y1 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trim55G3X8Y1 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trim55G3X8Y1 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trim55G3X8Y1 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim55G3X8Y1 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim55G3X8Y1 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC12.89□□□□□ -0.35
Trim55G3X8Y1 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms