Protein–RNA interactions for Protein: F6SEU4

Syngap1, Ras/Rap GTPase-activating protein SynGAP, mousemouse

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syngap1F6SEU4 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC14.17□□□□□ -0.14
Syngap1F6SEU4 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Syngap1F6SEU4 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Syngap1F6SEU4 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Syngap1F6SEU4 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Syngap1F6SEU4 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Syngap1F6SEU4 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Syngap1F6SEU4 Gm42941-201ENSMUST00000200347 1321 ntBASIC14.17□□□□□ -0.14
Syngap1F6SEU4 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Syngap1F6SEU4 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Syngap1F6SEU4 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Syngap1F6SEU4 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Syngap1F6SEU4 Gm11531-201ENSMUST00000117614 555 ntBASIC14.16□□□□□ -0.14
Syngap1F6SEU4 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC14.16□□□□□ -0.14
Syngap1F6SEU4 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC14.16□□□□□ -0.14
Syngap1F6SEU4 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC14.16□□□□□ -0.14
Syngap1F6SEU4 Gm17391-201ENSMUST00000171036 126 ntBASIC14.16□□□□□ -0.14
Syngap1F6SEU4 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
Syngap1F6SEU4 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Syngap1F6SEU4 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC14.16□□□□□ -0.14
Syngap1F6SEU4 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC14.16□□□□□ -0.14
Syngap1F6SEU4 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Syngap1F6SEU4 Gm5904-201ENSMUST00000210286 865 ntBASIC14.16□□□□□ -0.14
Syngap1F6SEU4 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC14.16□□□□□ -0.14
Syngap1F6SEU4 AC166992.1-201ENSMUST00000216356 565 ntBASIC14.16□□□□□ -0.14
Syngap1F6SEU4 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Syngap1F6SEU4 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Syngap1F6SEU4 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Syngap1F6SEU4 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Syngap1F6SEU4 AC167669.2-201ENSMUST00000224417 1620 ntBASIC14.16□□□□□ -0.14
Syngap1F6SEU4 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Syngap1F6SEU4 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Syngap1F6SEU4 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Syngap1F6SEU4 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Syngap1F6SEU4 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Syngap1F6SEU4 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Syngap1F6SEU4 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC14.16□□□□□ -0.14
Syngap1F6SEU4 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Syngap1F6SEU4 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Syngap1F6SEU4 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Syngap1F6SEU4 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC14.16□□□□□ -0.14
Syngap1F6SEU4 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Syngap1F6SEU4 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Syngap1F6SEU4 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Syngap1F6SEU4 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Syngap1F6SEU4 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Syngap1F6SEU4 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Syngap1F6SEU4 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Syngap1F6SEU4 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC14.16□□□□□ -0.14
Syngap1F6SEU4 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Syngap1F6SEU4 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Syngap1F6SEU4 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Syngap1F6SEU4 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Syngap1F6SEU4 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Syngap1F6SEU4 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC14.15□□□□□ -0.14
Syngap1F6SEU4 Rmrp-201ENSMUST00000157463 271 ntBASIC14.15□□□□□ -0.14
Syngap1F6SEU4 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC14.15□□□□□ -0.14
Syngap1F6SEU4 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Syngap1F6SEU4 Gm2546-201ENSMUST00000182630 991 ntBASIC14.15□□□□□ -0.14
Syngap1F6SEU4 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC14.15□□□□□ -0.14
Syngap1F6SEU4 Gm8856-201ENSMUST00000185254 1144 ntBASIC14.15□□□□□ -0.14
Syngap1F6SEU4 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC14.15□□□□□ -0.14
Syngap1F6SEU4 Gm43916-201ENSMUST00000205062 967 ntBASIC14.15□□□□□ -0.14
Syngap1F6SEU4 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Syngap1F6SEU4 AL732506.1-201ENSMUST00000226420 281 ntBASIC14.15□□□□□ -0.14
Syngap1F6SEU4 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Syngap1F6SEU4 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Syngap1F6SEU4 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC14.15□□□□□ -0.14
Syngap1F6SEU4 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Syngap1F6SEU4 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Syngap1F6SEU4 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Syngap1F6SEU4 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Syngap1F6SEU4 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Syngap1F6SEU4 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Syngap1F6SEU4 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Syngap1F6SEU4 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Syngap1F6SEU4 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Syngap1F6SEU4 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Syngap1F6SEU4 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Syngap1F6SEU4 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Syngap1F6SEU4 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Syngap1F6SEU4 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Syngap1F6SEU4 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Syngap1F6SEU4 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC14.15□□□□□ -0.15
Syngap1F6SEU4 Gm25214-201ENSMUST00000104573 129 ntBASIC14.15□□□□□ -0.15
Syngap1F6SEU4 Gm13045-201ENSMUST00000119019 712 ntBASIC14.15□□□□□ -0.15
Syngap1F6SEU4 Gm15547-201ENSMUST00000122152 333 ntBASIC14.15□□□□□ -0.15
Syngap1F6SEU4 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Syngap1F6SEU4 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC14.15□□□□□ -0.15
Syngap1F6SEU4 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC14.15□□□□□ -0.15
Syngap1F6SEU4 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Syngap1F6SEU4 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC14.15□□□□□ -0.15
Syngap1F6SEU4 Gm5621-201ENSMUST00000187303 640 ntBASIC14.15□□□□□ -0.15
Syngap1F6SEU4 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Syngap1F6SEU4 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.15
Syngap1F6SEU4 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Syngap1F6SEU4 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Syngap1F6SEU4 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Syngap1F6SEU4 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Syngap1F6SEU4 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC14.15□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms