Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
Gm3880A0A1B0GSB3 Smarcc2-203ENSMUST00000105235 4032 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Gm3880A0A1B0GSB3 Ccdc148-204ENSMUST00000226455 4612 ntAPPRIS ALT2 BASIC6.06□□□□□ -1.44
Gm3880A0A1B0GSB3 Sulf2-202ENSMUST00000109249 4580 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Gm3880A0A1B0GSB3 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Gm3880A0A1B0GSB3 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC6.06□□□□□ -1.44
Gm3880A0A1B0GSB3 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Gm3880A0A1B0GSB3 Aff1-202ENSMUST00000054979 8323 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Gm3880A0A1B0GSB3 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Gm3880A0A1B0GSB3 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
Gm3880A0A1B0GSB3 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Gm3880A0A1B0GSB3 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Gm3880A0A1B0GSB3 Ptpn21-201ENSMUST00000085116 5696 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 Arid5b-204ENSMUST00000219238 7581 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 Gm43172-201ENSMUST00000202139 2137 ntBASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 Gm43517-201ENSMUST00000110746 3904 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 Dsg1a-201ENSMUST00000077146 5686 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 Gm11185-201ENSMUST00000117732 1007 ntBASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 Gm12497-201ENSMUST00000138778 237 ntBASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 Mir7221-201ENSMUST00000184009 72 ntBASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 Pde11a-201ENSMUST00000099992 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 Lingo1-206ENSMUST00000210032 3627 ntTSL 5 BASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 Gpatch2-202ENSMUST00000065573 4547 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 Nav2-216ENSMUST00000184945 10665 ntAPPRIS P4 TSL 5 BASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 Trerf1-205ENSMUST00000190080 7045 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 Gm10463-202ENSMUST00000195772 2889 ntBASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 Dip2c-202ENSMUST00000169960 4801 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 Pakap-203ENSMUST00000150412 5163 ntAPPRIS P5 TSL 5 BASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 AC124751.1-201ENSMUST00000222716 1408 ntBASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 Wwtr1-202ENSMUST00000120977 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Gm3880A0A1B0GSB3 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Gm3880A0A1B0GSB3 Pcdhgc5-201ENSMUST00000055935 4741 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Gm3880A0A1B0GSB3 Dnmt1-202ENSMUST00000177754 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Gm3880A0A1B0GSB3 Stk36-201ENSMUST00000087183 5245 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Gm3880A0A1B0GSB3 Zfat-204ENSMUST00000162054 4386 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Gm3880A0A1B0GSB3 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Gm3880A0A1B0GSB3 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Gm3880A0A1B0GSB3 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Gm3880A0A1B0GSB3 Hecw2-201ENSMUST00000087659 11171 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Gm3880A0A1B0GSB3 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Gm3880A0A1B0GSB3 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Gm3880A0A1B0GSB3 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Gm3880A0A1B0GSB3 Dido1-204ENSMUST00000103055 4613 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Gm3880A0A1B0GSB3 Gm43375-201ENSMUST00000196705 2480 ntBASIC6.04□□□□□ -1.44
Gm3880A0A1B0GSB3 Tln2-201ENSMUST00000039662 8052 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Gm3880A0A1B0GSB3 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Gm3880A0A1B0GSB3 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC6.04□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 93.1 ms